RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 SLC17A7Q9P2U7 560 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 MARCOQ9UEW3 520 aaPredicted RBP11.76□□□□□ -0.53
VPS72-205ENST00000491094 PEX10O60683 326 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 BPIFB4P59827 614 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 CUL2Q13617 745 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 RCN2Q14257 317 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 C4orf19Q8IY42 314 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 TMEM130Q8N3G9 435 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 ZNF606Q8WXB4 792 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 ZNF75CPQ92670 426 aaPredicted RBP11.76□□□□□ -0.53
VPS72-205ENST00000491094 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
VPS72-205ENST00000491094 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
VPS72-205ENST00000491094 CCDC195A0A1B0GUA6 201 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 CST8O60676 142 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 NR3C2P08235 984 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 SRGAP2CP0DJJ0 459 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 NCKAP1LP55160 1127 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 HIF1AQ16665 826 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 FAXCQ5TGI0 409 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 ANKRD22Q5VYY1 191 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 KCTD17Q8N5Z5 321 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 RFWD2Q8NHY2 731 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 TCP10LQ8TDR4 215 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 FAM151AQ8WW52 585 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 CLEC4DQ8WXI8 215 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 ATG4CQ96DT6 458 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 FAM81BQ96LP2 452 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 SENP7Q9BQF6 1050 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 HEY2Q9UBP5 337 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 ATP8B3O60423 1300 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 KLRG2A4D1S0 409 aaPredicted RBP11.75□□□□□ -0.53
VPS72-205ENST00000491094 ASMTLO95671 621 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
VPS72-205ENST00000491094 PRKCEQ02156 737 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 MTMR2Q13614 643 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 MAPK6Q16659 721 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 RFWD3Q6PCD5 774 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 ACTL9Q8TC94 416 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 PPP1R16BQ96T49 567 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 TJP2Q9UDY2 1190 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 PRKAG3Q9UGI9 489 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 STRCQ7RTU9 1775 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 ZNF536O15090 1300 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 DNALI1O14645 258 aaPredicted RBP11.75□□□□□ -0.53
VPS72-205ENST00000491094 LIASO43766 372 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 KIF1CO43896 1103 aaKnown RBP11.75□□□□□ -0.53
VPS72-205ENST00000491094 ASNSP08243 561 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 TROVE2P10155 538 aaKnown RBP eCLIP11.75□□□□□ -0.53
VPS72-205ENST00000491094 FGFR1P11362 822 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 CTCFP49711 727 aaPredicted RBP11.75□□□□□ -0.53
VPS72-205ENST00000491094 NOMO3P69849 1222 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 CENPCQ03188 943 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
VPS72-205ENST00000491094 THNSL1Q8IYQ7 743 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 FAM71DQ8N9W8 422 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 C7orf43Q8WVR3 580 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 SLC13A1Q9BZW2 595 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 RNF146Q9NTX7 359 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 ADAMTSL1Q8N6G6 1762 aa11.75□□□□□ -0.53
VPS72-205ENST00000491094 GM2AP17900 193 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 MARK3P27448 753 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 MKRN3Q13064 507 aaKnown RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 NCOA4Q13772 614 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 GPAT2Q6NUI2 795 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 SYDE1Q6ZW31 735 aaPredicted RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 ZCCHC9Q8N567 271 aaKnown RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 CNKSR1Q969H4 720 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 MOV10L1Q9BXT6 1211 aaKnown RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 PARVAQ9NVD7 372 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 PPP1R1BQ9UD71 204 aaPredicted RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 MAPTP10636 758 aaKnown RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 MUTP22033 750 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 PSMA2P25787 234 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 GDF10P55107 478 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 OTUD4Q01804 1114 aaKnown RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 CDO1Q16878 200 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 MON1BQ7L1V2 547 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 C12orf56Q8IXR9 622 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 FBXO36Q8NEA4 188 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 TMC2Q8TDI7 906 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 MFSD14AQ96MC6 490 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 FAM111AQ96PZ2 611 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 MT-ND3P03897 115 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 GCNT1Q02742 428 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 MSS51Q4VC12 460 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 RNF43Q68DV7 783 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 RFX6Q8HWS3 928 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 ATP6V0A1Q93050 837 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 TRIM11Q96F44 468 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 CFAP36Q96G28 342 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 PRR11Q96HE9 360 aaPredicted RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 IQCGQ9H095 443 aaKnown RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 DENND2DQ9H6A0 471 aaPredicted RBP11.74□□□□□ -0.53
VPS72-205ENST00000491094 SLC5A4Q9NY91 659 aa11.74□□□□□ -0.53
VPS72-205ENST00000491094 CDK5RAP2Q96SN8 1893 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms