RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 POLR2MP0CAP2 368 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 ENO3P13929 434 aaPredicted RBP11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 SAT1P21673 171 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 RPA1P27694 616 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 UBXN2AP68543 259 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 GALNTL6Q49A17 601 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 TMEM119Q4V9L6 283 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 ADGRF4Q8IZF3 695 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 RNF169Q8NCN4 708 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 FBXL13Q8NEE6 735 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 USP6NLQ92738 828 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 XPO7Q9UIA9 1087 aaKnown RBP11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 SEC24DO94855 1032 aaPredicted RBP11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 PSMA2P25787 234 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 NCKAP1LP55160 1127 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 OLFML1Q6UWY5 402 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 SLFN11Q7Z7L1 901 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 PPIL6Q8IXY8 311 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 KIAA2013Q8IYS2 634 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 NDUFAF2Q8N183 169 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 PWWP2AQ96N64 755 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 MID2Q9UJV3 735 aa11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.83□□□□□ -0.52
CRNKL1-204ENST00000490910 UQCRBP14927 111 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 GIT2Q14161 759 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 RPS6KA2Q15349 733 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 CATSPER3Q86XQ3 398 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ENDOVQ8N8Q3 282 aaKnown RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 WASF2Q9Y6W5 498 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 MEI4A8MW99 385 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 SMIM22K7EJ46 135 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 SPAG6O75602 509 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 USP1O94782 785 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 OCM2P0CE71 109 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 OCMP0CE72 109 aaPredicted RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 FOXN2P32314 431 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ACAD10Q6JQN1 1059 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 C16orf89Q6UX73 402 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ENOSF1Q7L5Y1 443 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 NANOGNBQ7Z5D8 188 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 DEFB107AQ8IZN7 70 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ZCCHC9Q8N567 271 aaKnown RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 SENP7Q9BQF6 1050 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 MMTAG2Q9BU76 263 aaKnown RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 C10orf88Q9H8K7 445 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 DDX56Q9NY93 547 aaKnown RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 PTTG2Q9NZH5 202 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 SERPINB13Q9UIV8 391 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ATRNO75882 1429 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 NID2Q14112 1375 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 DIP2CQ9Y2E4 1556 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 F8W8V4 182 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ECHS1P30084 290 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 HOXA13P31271 388 aaPredicted RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 CIITAP33076 1130 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 EIF2B2P49770 351 aaKnown RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 MTTPP55157 894 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 KBTBD12Q3ZCT8 623 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 TTC39BQ5VTQ0 682 aaPredicted RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ULK2Q8IYT8 1036 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 DNAJC19Q96DA6 116 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 RUSC1Q9BVN2 902 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 DNAI2Q9GZS0 605 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 MTFR1LQ9H019 292 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 TIMMDC1Q9NPL8 285 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ARHGAP23Q9P227 1491 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 DNALI1O14645 258 aaPredicted RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 P4HA2O15460 535 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 MED24O75448 989 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ABHD2P08910 425 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 SMARCA1P28370 1054 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 HMOX2P30519 316 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 PEX3P56589 373 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 TMEM270Q6UE05 265 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 TRIM72Q6ZMU5 477 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 RAPH1Q70E73 1250 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 FBXO36Q8NEA4 188 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 PIGBQ92521 554 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 TUBGCP5Q96RT8 1024 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 SMYD2Q9NRG4 433 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 AGPAT3Q9NRZ7 376 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 MINPP1Q9UNW1 487 aa11.82□□□□□ -0.52
CRNKL1-204ENST00000490910 ZBBXA8MT70 800 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 KPNA7A9QM74 516 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 CBFA2T3O75081 653 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 RRM1P23921 792 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 ARL1P40616 181 aaPredicted RBP11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 TCHHL1Q5QJ38 904 aaPredicted RBP11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 MFSD4BQ5TF39 518 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 RSPH3Q86UC2 560 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 AGR3Q8TD06 166 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 SDCCAG3Q96C92 435 aa11.81□□□□□ -0.52
CRNKL1-204ENST00000490910 DCUN1D5Q9BTE7 237 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms