RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 SLC5A9Q2M3M2 681 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 LMBRD2Q68DH5 695 aaPredicted RBP16.38■□□□□ 0.21
COL27A1-206ENST00000490831 THEM5Q8N1Q8 247 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 SLC44A3Q8N4M1 653 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 FBXL6Q8N531 539 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 RSAD2Q8WXG1 361 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 GDE1Q9NZC3 331 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 RAPGEFL1Q9UHV5 662 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 L1RE1Q9UN81 338 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 HCN4Q9Y3Q4 1203 aa16.38■□□□□ 0.21
COL27A1-206ENST00000490831 PDXKO00764 312 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 TNNC2P02585 160 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 DUSP4Q13115 394 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 PLD1Q13393 1074 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-206ENST00000490831 TMEM86AQ8N2M4 240 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 ELMOD1Q8N336 334 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 PDCL2Q8N4E4 241 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 TOP6BLQ8N6T0 577 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 RDH13Q8NBN7 331 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 ATAD1Q8NBU5 361 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 LEMD2Q8NC56 503 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 C2orf15Q8WU43 125 aaKnown RBP16.37■□□□□ 0.21
COL27A1-206ENST00000490831 PGLYRP2Q96PD5 576 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 CGRRF1Q99675 332 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 DNAJC25Q9H1X3 360 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 KCNH6Q9H252 994 aa16.37■□□□□ 0.21
COL27A1-206ENST00000490831 MRPS23Q9Y3D9 190 aaKnown RBP16.37■□□□□ 0.21
COL27A1-206ENST00000490831 ZNF197O14709 1029 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 GABRDO14764 452 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 HUS1O60921 280 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 KIF20AO95235 890 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 KRT19P08727 400 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 CLDN10P78369 228 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 BFSP1Q12934 665 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 MYO1EQ12965 1108 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
COL27A1-206ENST00000490831 IQCEQ6IPM2 695 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 POTEHQ6S545 545 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 MTSS1LQ765P7 747 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 DPH6Q7L8W6 267 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 TRAPPC11Q7Z392 1133 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 LRRTM3Q86VH5 581 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 ENGASEQ8NFI3 743 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 FGF14Q92915 247 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
COL27A1-206ENST00000490831 ZNF512Q96ME7 567 aaPredicted RBP16.36■□□□□ 0.21
COL27A1-206ENST00000490831 FNBP1Q96RU3 617 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 CORO1BQ9BR76 489 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 LRRC3Q9BY71 257 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 TRAF3IP3Q9Y228 551 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 ASB3Q9Y575 518 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 NUMBLQ9Y6R0 609 aa16.36■□□□□ 0.21
COL27A1-206ENST00000490831 EXOC3O60645 756 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 MOSPD3O75425 235 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 DLATP10515 647 aaKnown RBP16.35■□□□□ 0.21
COL27A1-206ENST00000490831 SRFP11831 508 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 CCR2P41597 374 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 NFIL3Q16649 462 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 SOWAHAQ2M3V2 549 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 SLC39A12Q504Y0 691 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 PARM1Q6UWI2 310 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 PDZD4Q76G19 769 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-206ENST00000490831 TMC8Q8IU68 726 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 DCP1BQ8IZD4 617 aaKnown RBP16.35■□□□□ 0.21
COL27A1-206ENST00000490831 TTC9BQ8N6N2 239 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 SPPL2BQ8TCT7 592 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 PLEKHO2Q8TD55 490 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 ZNF516Q92618 1163 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 CCDC34Q96HJ3 373 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 HPDLQ96IR7 371 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 PKMYT1Q99640 499 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 ACBD6Q9BR61 282 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 SLC2A4RGQ9NR83 387 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 WNT16Q9UBV4 365 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 CIZ1Q9ULV3 898 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-206ENST00000490831 SNX9Q9Y5X1 595 aa16.35■□□□□ 0.21
COL27A1-206ENST00000490831 MUC6Q6W4X9 2439 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 NRG2O14511 850 aaPredicted RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 NARSO43776 548 aaKnown RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 STAU1O95793 577 aaKnown RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 PDGFBP01127 241 aaPredicted RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 NR3C1P04150 777 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 FAM163BP0C2L3 166 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 CEBPBP17676 345 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 TNNI1P19237 187 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 ALDH1A3P47895 512 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 LHX1P48742 406 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 TUFMP49411 452 aaKnown RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 EPHB3P54753 998 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 FAM160A1Q05DH4 1040 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 CYP4A22Q5TCH4 519 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 SUGP1Q8IWZ8 645 aaKnown RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 HS6ST3Q8IZP7 471 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 GUF1Q8N442 669 aaKnown RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 PARD3BQ8TEW8 1205 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 ING5Q8WYH8 240 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 PSMG2Q969U7 264 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 CCDC127Q96BQ5 260 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 TCEAL4Q96EI5 215 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms