RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CISHQ9NSE2 258 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 BARX2Q9UMQ3 279 aaPredicted RBP11.7□□□□□ -0.54
VARS2-210ENST00000490699 POLIQ9UNA4 740 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 FHOD1Q9Y613 1164 aa11.7□□□□□ -0.54
VARS2-210ENST00000490699 ATP8B3O60423 1300 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 LCHNA4D1U4 455 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 GRXCR1A8MXD5 290 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 RBAK-RBAKDNI3L0D1 243 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 SOD2P04179 222 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 WEE2P0C1S8 567 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 FERP16591 822 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 WARSP23381 471 aaKnown RBP11.69□□□□□ -0.54
VARS2-210ENST00000490699 KRT9P35527 623 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 GNL1P36915 607 aaPredicted RBP11.69□□□□□ -0.54
VARS2-210ENST00000490699 BRCC3P46736 316 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 GLUD2P49448 558 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 KLK7P49862 253 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 PDE6CP51160 858 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 PLCB3Q01970 1234 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 PTK2Q05397 1052 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 CCDC173Q0VFZ6 552 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 MAPRE1Q15691 268 aaKnown RBP11.69□□□□□ -0.54
VARS2-210ENST00000490699 ASIC2Q16515 512 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
VARS2-210ENST00000490699 SFMBT2Q5VUG0 894 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 TMEM270Q6UE05 265 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 DDX53Q86TM3 631 aaKnown RBP11.69□□□□□ -0.54
VARS2-210ENST00000490699 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 SPC24Q8NBT2 197 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 C3orf58Q8NDZ4 430 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 TIFAQ96CG3 184 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 HERC2P3Q9BVR0 1158 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 PBX4Q9BYU1 374 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 PDCL3Q9H2J4 239 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 SMYD3Q9H7B4 428 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 APOBEC3GQ9HC16 384 aaKnown RBP11.69□□□□□ -0.54
VARS2-210ENST00000490699 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 ENTPD7Q9NQZ7 604 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.69□□□□□ -0.54
VARS2-210ENST00000490699 MRPL17Q9NRX2 175 aaKnown RBP11.69□□□□□ -0.54
VARS2-210ENST00000490699 MARCH5Q9NX47 278 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 HCSTQ9UBK5 93 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 CAPN11Q9UMQ6 739 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 LZTS1Q9Y250 596 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 NLRC5Q86WI3 1866 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 SCN1AP35498 2009 aa11.69□□□□□ -0.54
VARS2-210ENST00000490699 KIAA1671Q9BY89 1806 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 OR6C75A6NL08 312 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 F8VZ95 297 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 I3L4J1 428 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 SPTLC1O15269 473 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 AP5Z1O43299 807 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 MED7O43513 233 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 B4GALT3O60512 393 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 CYP11A1P05108 521 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 DNAJB2P25686 324 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 TKTP29401 623 aaKnown RBP11.68□□□□□ -0.54
VARS2-210ENST00000490699 CASP14P31944 242 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 SOX5P35711 763 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 RAP1GAPP47736 663 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 SLC8A3P57103 927 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 PTPN21Q16825 1174 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 SOWAHAQ2M3V2 549 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 CTXN3Q4LDR2 81 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 WSCD1Q658N2 575 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 PDE12Q6L8Q7 609 aaKnown RBP11.68□□□□□ -0.54
VARS2-210ENST00000490699 GJB7Q6PEY0 223 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 DCP1BQ8IZD4 617 aaKnown RBP11.68□□□□□ -0.54
VARS2-210ENST00000490699 VPS52Q8N1B4 723 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 KLHL23Q8NBE8 558 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 RBBP8NLQ8NC74 664 aaPredicted RBP11.68□□□□□ -0.54
VARS2-210ENST00000490699 OR8K1Q8NGG5 319 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 SHC3Q92529 594 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 PPP2R3CQ969Q6 453 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 NKX2-4Q9H2Z4 354 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 DDX43Q9NXZ2 648 aaKnown RBP11.68□□□□□ -0.54
VARS2-210ENST00000490699 KIAA1257Q9ULG3 409 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 CEP83Q9Y592 693 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 BZW2Q9Y6E2 419 aaKnown RBP11.68□□□□□ -0.54
VARS2-210ENST00000490699 GBF1Q92538 1859 aa11.68□□□□□ -0.54
VARS2-210ENST00000490699 LRRC53A6NM62 1247 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 C5orf67F2Z3F1 127 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 MFAP3LO75121 409 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 GFPT2O94808 682 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 NOL4O94818 638 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 GYPCP04921 128 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 ITGB1P05556 798 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 PAEPP09466 180 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 CPB1P15086 417 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 MYOGP15173 224 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 CD19P15391 556 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 FGFR3P22607 806 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 NDST1P52848 882 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 ERVK-21P61565 698 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 TAP1Q03518 808 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 ARID5AQ03989 594 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 INCA1Q0VD86 236 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 GPM6BQ13491 265 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms