RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 HLA-DPA1P20036 260 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SOX6P35712 828 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 TAS2R42Q7RTR8 314 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 IGDCC4Q8TDY8 1250 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SEPT1Q8WYJ6 367 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PCSK1NQ9UHG2 260 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 DRG1Q9Y295 367 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 MYH6P13533 1939 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PI4K2BG5E9Z4 385 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 HABP4Q5JVS0 413 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 HORMAD1Q86X24 394 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 OR6J1Q8NGC5 347 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 DIABLOQ9NR28 239 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 RRN3Q9NYV6 651 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 MAGEB16A2A368 324 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 MAPTP10636 758 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 CPB1P15086 417 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 NAA20P61599 178 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 THEMIS2Q5TEJ8 643 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 TRIM65Q6PJ69 517 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 C3orf62Q6ZUJ4 267 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 GLYCTKQ8IVS8 523 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 NSL1Q96IY1 281 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 OSBPL1AQ9BXW6 950 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 AAASQ9NRG9 546 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 H0Y3Z8 333 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 PJA2O43164 708 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SRP72O76094 671 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 LSM8O95777 96 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 GALCP54803 685 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 HLFQ16534 295 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SRLQ86TD4 932 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 FEZF2Q8TBJ5 459 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SLITRK1Q96PX8 696 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 UBE2OQ9C0C9 1292 aaKnown RBP9.24□□□□□ -0.93
LSAMP-205ENST00000490035 SLC7A5P2Q9GIP4 190 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 BRD8Q9H0E9 1235 aa9.24□□□□□ -0.93
LSAMP-205ENST00000490035 TK2O00142 265 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 O00370 1275 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 GZMAP12544 262 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 HARS2P49590 506 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 MRPS15P82914 257 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 TFDP3Q5H9I0 405 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 SPDYCQ5MJ68 293 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 PARK7Q99497 189 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 SARS2Q9NP81 518 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 PKP3Q9Y446 797 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 SPACA6W5XKT8 324 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 H7C0S8 307 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 TADA2AO75478 443 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 PDHA1P08559 390 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 PDGFRAP16234 1089 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 KCNK10P57789 538 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 HIPK4Q8NE63 616 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 TFB1MQ8WVM0 346 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 USP6NLQ92738 828 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 PLEKHA8Q96JA3 519 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 SEC16BQ96JE7 1060 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 PPRC1Q5VV67 1664 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 DNAJB2P25686 324 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 METTL16Q86W50 562 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 FNDC3AQ9Y2H6 1198 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 CCT8L1PA6NM43 557 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 KIF28PB7ZC32 967 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 EEF2KO00418 725 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 SNAPC2Q13487 334 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 SEPT12Q8IYM1 358 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 NIF3L1Q9GZT8 377 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 ILKAPQ9H0C8 392 aaPredicted RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 AFDNP55196 1824 aaKnown RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 GPD1P21695 349 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 VHLP40337 213 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 PTK7Q13308 1070 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 WDR72Q3MJ13 1102 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 RNF149Q8NC42 400 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 CHMP2BQ9UQN3 213 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 C2orf81A6NN90 581 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 ZSCAN9O15535 394 aaPredicted RBP9.23□□□□□ -0.93
LSAMP-205ENST00000490035 ACCSLQ4AC99 568 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 SPDYAQ5MJ70 313 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 JADE3Q92613 823 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 HINFPQ9BQA5 517 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 TMEM161AQ9NX61 479 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 ZNF229Q9UJW7 825 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 ZNRF3Q9ULT6 936 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 AURKCQ9UQB9 309 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 RGL2O15211 777 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 ADCY3O60266 1144 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 CHN1P15882 459 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 KYNUQ16719 465 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 PRMT9Q6P2P2 845 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 UNC45BQ8IWX7 931 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 USP38Q8NB14 1042 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 SLC7A14Q8TBB6 771 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 ANKS1AQ92625 1134 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 GPRASP2Q96D09 838 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 EMILIN2Q9BXX0 1053 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 CEP44Q9C0F1 390 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 MANSC1Q9H8J5 431 aa9.23□□□□□ -0.93
LSAMP-205ENST00000490035 GLRA3O75311 464 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms