RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 OR6C75A6NL08 312 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 GOLGA8JA6NMD2 632 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 CUTAO60888 179 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 ODC1P11926 461 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 CPB1P15086 417 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 ABCD1P33897 745 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 MATR3P43243 847 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRSF4-204ENST00000489898 CDR1P51861 262 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 DNM1Q05193 864 aaKnown RBP12.78□□□□□ -0.36
SRSF4-204ENST00000489898 DUSP4Q13115 394 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 STK38Q15208 465 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
SRSF4-204ENST00000489898 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 MTSS1LQ765P7 747 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 CBWD2Q8IUF1 395 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 GRAMD1CQ8IYS0 662 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 DTWD2Q8NBA8 298 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 STKLD1Q8NE28 680 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 FLCNQ8NFG4 579 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
SRSF4-204ENST00000489898 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 C7orf25Q9BPX7 421 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 FAM213AQ9BRX8 229 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 MTMR12Q9C0I1 747 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 PDE11AQ9HCR9 933 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 PANK4Q9NVE7 773 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 HPSEQ9Y251 543 aa12.78□□□□□ -0.36
SRSF4-204ENST00000489898 MRPS23Q9Y3D9 190 aaKnown RBP12.78□□□□□ -0.36
SRSF4-204ENST00000489898 MYOFQ9NZM1 2061 aa12.77□□□□□ -0.36
SRSF4-204ENST00000489898 SPAG17Q6Q759 2223 aa12.77□□□□□ -0.36
SRSF4-204ENST00000489898 FAM237AA0A1B0GTK4 181 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 PRR23AA6NEV1 266 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 PRRG1O14668 218 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 EIF3DO15371 548 aaKnown RBP eCLIP12.77□□□□□ -0.37
SRSF4-204ENST00000489898 EXTL3O43909 919 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 IL18RAPO95256 599 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 LRG1P02750 347 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 ITGB3P05106 788 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 TDGF1P13385 188 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 IDEP14735 1019 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
SRSF4-204ENST00000489898 PTPN2P17706 415 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.37
SRSF4-204ENST00000489898 POLR2BP30876 1174 aaKnown RBP12.77□□□□□ -0.37
SRSF4-204ENST00000489898 TXLNAP40222 546 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 TAF6P49848 677 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 CUL4BQ13620 913 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 TEAD2Q15562 447 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 MLF2Q15773 248 aaPredicted RBP12.77□□□□□ -0.37
SRSF4-204ENST00000489898 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.37
SRSF4-204ENST00000489898 SLFN12LQ6IEE8 588 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 NT5DC4Q86YG4 428 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 KIAA0895Q8NCT3 520 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 ZNF507Q8TCN5 953 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 PSMG2Q969U7 264 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 DHX58Q96C10 678 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 LPIN3Q9BQK8 851 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 RBAKQ9NYW8 714 aaPredicted RBP12.77□□□□□ -0.37
SRSF4-204ENST00000489898 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 PLXND1Q9Y4D7 1925 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.37
SRSF4-204ENST00000489898 GABRDO14764 452 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 XPOTO43592 962 aaKnown RBP12.76□□□□□ -0.37
SRSF4-204ENST00000489898 DCNP07585 359 aaKnown RBP12.76□□□□□ -0.37
SRSF4-204ENST00000489898 GPR15P49685 360 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 ALCAMQ13740 583 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 GRM2Q14416 872 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 ANGPT1Q15389 498 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 FOXD4L6Q3SYB3 417 aaPredicted RBP12.76□□□□□ -0.37
SRSF4-204ENST00000489898 FOXD4L3Q6VB84 417 aaPredicted RBP12.76□□□□□ -0.37
SRSF4-204ENST00000489898 UNC13DQ70J99 1090 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
SRSF4-204ENST00000489898 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 OXCT2Q9BYC2 517 aaPredicted RBP12.76□□□□□ -0.37
SRSF4-204ENST00000489898 CUEDC2Q9H467 287 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 PCIF1Q9H4Z3 704 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 LTB4R2Q9NPC1 389 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 AGPAT3Q9NRZ7 376 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 TMEM30AQ9NV96 361 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 GDAP2Q9NXN4 497 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 RCOR1Q9UKL0 485 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 SLC27A5Q9Y2P5 690 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 UBE4BO95155 1302 aa12.76□□□□□ -0.37
SRSF4-204ENST00000489898 A0A1W2PRU2 124 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 KPNA7A9QM74 516 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 CD72P21854 359 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 VIPR2P41587 438 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 FCHO2Q0JRZ9 810 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 SNW1Q13573 536 aaKnown RBP12.75□□□□□ -0.37
SRSF4-204ENST00000489898 SLC39A12Q504Y0 691 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 FAM26FQ5R3K3 315 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 DSTYKQ6XUX3 929 aa12.75□□□□□ -0.37
SRSF4-204ENST00000489898 PDZD4Q76G19 769 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms