RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 FAM86C2PA6NEL3 165 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 LAMP2P13473 410 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 CLDN10P78369 228 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 TWF1Q12792 350 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 PABPC1LQ4VXU2 614 aaKnown RBP20.56■□□□□ 0.88
EPHB4-207ENST00000489808 GET4Q7L5D6 327 aaPredicted RBP20.56■□□□□ 0.88
EPHB4-207ENST00000489808 DPH6Q7L8W6 267 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 LRRTM3Q86VH5 581 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 SMYD4Q8IYR2 804 aaPredicted RBP20.56■□□□□ 0.88
EPHB4-207ENST00000489808 TMEM86AQ8N2M4 240 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 TOP6BLQ8N6T0 577 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 ITFG1Q8TB96 612 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 ERCC4Q92889 916 aaPredicted RBP20.56■□□□□ 0.88
EPHB4-207ENST00000489808 SMARCE1Q969G3 411 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 KCNK12Q9HB15 430 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 AVENQ9NQS1 362 aaPredicted RBP20.56■□□□□ 0.88
EPHB4-207ENST00000489808 FRMD4BQ9Y2L6 1034 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 SLC27A5Q9Y2P5 690 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 ANK1P16157 1881 aa20.56■□□□□ 0.88
EPHB4-207ENST00000489808 MTMR11A4FU01 709 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 RHOP08100 348 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 AP3M2P53677 418 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 SOWAHAQ2M3V2 549 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 SLC39A12Q504Y0 691 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 ZNF658Q5TYW1 1059 aaPredicted RBP20.55■□□□□ 0.88
EPHB4-207ENST00000489808 CEP135Q66GS9 1140 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 TRIM67Q6ZTA4 783 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 LIMS2Q7Z4I7 341 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 SPATA18Q8TC71 538 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 ZNF512Q96ME7 567 aaPredicted RBP20.55■□□□□ 0.88
EPHB4-207ENST00000489808 CEP72Q9P209 647 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 HSFX1Q9UBD0 423 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 CDH7Q9ULB5 785 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 SORCS3Q9UPU3 1222 aa20.55■□□□□ 0.88
EPHB4-207ENST00000489808 ZFP37Q9Y6Q3 630 aaPredicted RBP20.55■□□□□ 0.88
EPHB4-207ENST00000489808 SCN1AP35498 2009 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 LRRIQ3A6PVS8 624 aaPredicted RBP20.54■□□□□ 0.88
EPHB4-207ENST00000489808 GABRDO14764 452 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 KINO60870 393 aaKnown RBP20.54■□□□□ 0.88
EPHB4-207ENST00000489808 C4BPAP04003 597 aaKnown RBP20.54■□□□□ 0.88
EPHB4-207ENST00000489808 RPL13P26373 211 aaKnown RBP20.54■□□□□ 0.88
EPHB4-207ENST00000489808 PRCPP42785 496 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 LHX1P48742 406 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 SMARCB1Q12824 385 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 ADAM9Q13443 819 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 COBLL1Q53SF7 1204 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 DCP1BQ8IZD4 617 aaKnown RBP20.54■□□□□ 0.88
EPHB4-207ENST00000489808 ELMOD1Q8N336 334 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 TMC2Q8TDI7 906 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 ACBD6Q9BR61 282 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 CORO1BQ9BR76 489 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 DDX43Q9NXZ2 648 aaKnown RBP20.54■□□□□ 0.88
EPHB4-207ENST00000489808 IGSF9Q9P2J2 1179 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 MRPS23Q9Y3D9 190 aaKnown RBP20.54■□□□□ 0.88
EPHB4-207ENST00000489808 YIPF1Q9Y548 306 aa20.54■□□□□ 0.88
EPHB4-207ENST00000489808 PRR33A8MZF0 331 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 MAPK13O15264 365 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 NR2F2P24468 414 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 ALDH1A3P47895 512 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 DLG4P78352 724 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 TRPC3Q13507 836 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 MTMR3Q13615 1198 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 ZCWPW2Q504Y3 356 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 IQCEQ6IPM2 695 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 OSTM1Q86WC4 334 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 UBALD2Q8IYN6 164 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 C2orf15Q8WU43 125 aaKnown RBP20.53■□□□□ 0.88
EPHB4-207ENST00000489808 FGF13Q92913 245 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 NXPE3Q969Y0 559 aa20.53■□□□□ 0.88
EPHB4-207ENST00000489808 GTPBP4Q9BZE4 634 aaKnown RBP20.53■□□□□ 0.88
EPHB4-207ENST00000489808 ANHXE9PGG2 379 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 IKBKBO14920 756 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 PHACTR2O75167 634 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 AKAP3O75969 853 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 STAU1O95793 577 aaKnown RBP20.52■□□□□ 0.88
EPHB4-207ENST00000489808 FAM163BP0C2L3 166 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 TUFMP49411 452 aaKnown RBP20.52■□□□□ 0.88
EPHB4-207ENST00000489808 EPHB3P54753 998 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 MYL6P60660 151 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 UBE2HP62256 183 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 MYL7Q01449 175 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 TSPY1Q01534 308 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 SIGLEC14Q08ET2 396 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 PLD1Q13393 1074 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 TDGQ13569 410 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 SLC5A9Q2M3M2 681 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 EDRF1Q3B7T1 1238 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 CYP4A22Q5TCH4 519 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 TDRD10Q5VZ19 366 aaKnown RBP20.52■□□□□ 0.88
EPHB4-207ENST00000489808 ADGRF2Q8IZF7 708 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 TMLHEQ9NVH6 421 aa20.52■□□□□ 0.88
EPHB4-207ENST00000489808 TMEM221A6NGB7 291 aa20.51■□□□□ 0.87
EPHB4-207ENST00000489808 M0R296 226 aa20.51■□□□□ 0.87
EPHB4-207ENST00000489808 ZNF197O14709 1029 aa20.51■□□□□ 0.87
EPHB4-207ENST00000489808 MICAL2O94851 1124 aa20.51■□□□□ 0.87
EPHB4-207ENST00000489808 ATICP31939 592 aa20.51■□□□□ 0.87
EPHB4-207ENST00000489808 PSMC2P35998 433 aaKnown RBP20.51■□□□□ 0.87
EPHB4-207ENST00000489808 CDR1P51861 262 aa20.51■□□□□ 0.87
EPHB4-207ENST00000489808 BIRC3Q13489 604 aa20.51■□□□□ 0.87
EPHB4-207ENST00000489808 WDR72Q3MJ13 1102 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms