RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 LRRC63Q05C16 580 aa18.64■□□□□ 0.57
MDC1-206ENST00000489540 MORC3Q14149 939 aa18.64■□□□□ 0.57
MDC1-206ENST00000489540 ISM2Q6H9L7 571 aa18.64■□□□□ 0.57
MDC1-206ENST00000489540 OR10T2Q8NGX3 314 aa18.64■□□□□ 0.57
MDC1-206ENST00000489540 MKNK1Q9BUB5 465 aa18.64■□□□□ 0.57
MDC1-206ENST00000489540 ZCWPW1Q9H0M4 648 aa18.64■□□□□ 0.57
MDC1-206ENST00000489540 L1RE1Q9UN81 338 aa18.64■□□□□ 0.57
MDC1-206ENST00000489540 POLIQ9UNA4 740 aa18.64■□□□□ 0.57
MDC1-206ENST00000489540 CLUHO75153 1309 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 NCOR1O75376 2440 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 OR4Q2P0C623 313 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 BIRC3Q13489 604 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 SOWAHAQ2M3V2 549 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 ANKRD40Q6AI12 368 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 LIMS2Q7Z4I7 341 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 RNF135Q8IUD6 432 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 DCP1BQ8IZD4 617 aaKnown RBP18.63■□□□□ 0.57
MDC1-206ENST00000489540 TRIML1Q8N9V2 468 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 TDRD5Q8NAT2 981 aaKnown RBP18.63■□□□□ 0.57
MDC1-206ENST00000489540 SYAP1Q96A49 352 aaPredicted RBP18.63■□□□□ 0.57
MDC1-206ENST00000489540 RTP3Q9BQQ7 232 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 ACBD6Q9BR61 282 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.63■□□□□ 0.57
MDC1-206ENST00000489540 KIAA1468Q9P260 1216 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 HSFX1Q9UBD0 423 aa18.63■□□□□ 0.57
MDC1-206ENST00000489540 C2CD4DB7Z1M9 353 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 CCNE1P24864 410 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 MCCD1P59942 119 aaPredicted RBP18.62■□□□□ 0.57
MDC1-206ENST00000489540 DLG4P78352 724 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 MYL7Q01449 175 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 TSPY1Q01534 308 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 CAMK4Q16566 473 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 TDRD10Q5VZ19 366 aaKnown RBP18.62■□□□□ 0.57
MDC1-206ENST00000489540 GRASPQ7Z6J2 395 aaPredicted RBP18.62■□□□□ 0.57
MDC1-206ENST00000489540 ZDHHC14Q8IZN3 488 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 C2orf15Q8WU43 125 aaKnown RBP18.62■□□□□ 0.57
MDC1-206ENST00000489540 PGLYRP2Q96PD5 576 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 TMEM209Q96SK2 561 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 INSL5Q9Y5Q6 135 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 CUL9Q8IWT3 2517 aa18.62■□□□□ 0.57
MDC1-206ENST00000489540 ANK1P16157 1881 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 PI4K2BG5E9Z4 385 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 BIN1O00499 593 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 GABRDO14764 452 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 EPB41P11171 864 aaKnown RBP18.61■□□□□ 0.57
MDC1-206ENST00000489540 ALADP13716 330 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 BMP6P22004 513 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 SP100P23497 879 aaPredicted RBP18.61■□□□□ 0.57
MDC1-206ENST00000489540 PCSK1P29120 753 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 MYL6P60660 151 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 DUSP4Q13115 394 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 NCOA4Q13772 614 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 WDR72Q3MJ13 1102 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 ZACNQ401N2 412 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 SV2AQ7L0J3 742 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 ZC3H3Q8IXZ2 948 aaKnown RBP18.61■□□□□ 0.57
MDC1-206ENST00000489540 ADGRF2Q8IZF7 708 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 ELMOD1Q8N336 334 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 ATAD1Q8NBU5 361 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 MMS19Q96T76 1030 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 VRTNQ9H8Y1 702 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 LMBRD1Q9NUN5 540 aa18.61■□□□□ 0.57
MDC1-206ENST00000489540 DDX43Q9NXZ2 648 aaKnown RBP18.61■□□□□ 0.57
MDC1-206ENST00000489540 MTMR11A4FU01 709 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 PPP1R3GB7ZBB8 358 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 SLC16A3O15427 465 aaKnown RBP18.6■□□□□ 0.57
MDC1-206ENST00000489540 VNN2O95498 520 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 PTPN2P17706 415 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 FSHRP23945 695 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 GTF2H1P32780 548 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 TUFMP49411 452 aaKnown RBP18.6■□□□□ 0.57
MDC1-206ENST00000489540 PMS1P54277 932 aaKnown RBP18.6■□□□□ 0.57
MDC1-206ENST00000489540 TNNC1P63316 161 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 PLD1Q13393 1074 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 SGSM1Q2NKQ1 1148 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 SLC39A12Q504Y0 691 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 C1orf220Q5T0J3 134 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 FOXR2Q6PJQ5 311 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 ZNF512Q96ME7 567 aaPredicted RBP18.6■□□□□ 0.57
MDC1-206ENST00000489540 XYLT2Q9H1B5 865 aa18.6■□□□□ 0.57
MDC1-206ENST00000489540 DNMT3BQ9UBC3 853 aaKnown RBP18.6■□□□□ 0.57
MDC1-206ENST00000489540 PLXNA3P51805 1871 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 STX10O60499 249 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 TACC1O75410 805 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 CD44P16070 742 aaKnown RBP18.59■□□□□ 0.57
MDC1-206ENST00000489540 WARSP23381 471 aaKnown RBP18.59■□□□□ 0.57
MDC1-206ENST00000489540 GBP2P32456 591 aaPredicted RBP18.59■□□□□ 0.57
MDC1-206ENST00000489540 ALDH1A3P47895 512 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 TWF1Q12792 350 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 NFE2Q16621 373 aaPredicted RBP18.59■□□□□ 0.57
MDC1-206ENST00000489540 PABPC1LQ4VXU2 614 aaKnown RBP18.59■□□□□ 0.57
MDC1-206ENST00000489540 IQCEQ6IPM2 695 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 LRRTM3Q86VH5 581 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 SPPL2BQ8TCT7 592 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 TAF4BQ92750 862 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 EEF2KMTQ96G04 330 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 CLSTN2Q9H4D0 955 aa18.59■□□□□ 0.57
MDC1-206ENST00000489540 AVENQ9NQS1 362 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms