RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 KIFC3Q9BVG8 833 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 TLR10Q9BXR5 811 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 NIF3L1Q9GZT8 377 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 KATNBL1Q9H079 304 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 SLITRK6Q9H5Y7 841 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 VIPAS39Q9H9C1 493 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 PTPRHQ9HD43 1115 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 WDR35Q9P2L0 1181 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 RASAL2Q9UJF2 1139 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 NOCTQ9UK39 431 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 ITGA11Q9UKX5 1188 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 MTUS1Q9ULD2 1270 aa6.79□□□□□ -1.32
SF3A3-208ENST00000489537 LAMA2P24043 3122 aaKnown RBP6.79□□□□□ -1.32
SF3A3-208ENST00000489537 A0A1B0GUA9 196 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 ARHGEF37A1IGU5 675 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 MBLAC1A4D2B0 266 aaPredicted RBP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 A6NNZ2 444 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 MYO1FO00160 1098 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 BUB1O43683 1085 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 LRRN2O75325 713 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 AP1G2O75843 785 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CABYRO75952 493 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CD4P01730 458 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CYP1A2P05177 515 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CCL5P13501 91 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 TNFRSF8P28908 595 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 ADCYAP1R1P41586 468 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 ACOT2P49753 483 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 FLT3LGP49771 235 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 NLRP11P59045 1033 aaKnown RBP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 NKX3-2P78367 333 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 APBA1Q02410 837 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CENPCQ03188 943 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 MBTD1Q05BQ5 628 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 PAK2Q13177 524 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CUL1Q13616 776 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CLEC16AQ2KHT3 1053 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 ZNF699Q32M78 642 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 TUBB8Q3ZCM7 444 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 HABP4Q5JVS0 413 aaKnown RBP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 SEL1L2Q5TEA6 688 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 TDRD10Q5VZ19 366 aaKnown RBP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 NFRKBQ6P4R8 1299 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 SLC27A1Q6PCB7 646 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 EMBQ6PCB8 327 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CEP128Q6ZU80 1094 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 TLK2Q86UE8 772 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 LRRC57Q8N9N7 239 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 SPATA4Q8NEY3 305 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 SLC35G2Q8TBE7 412 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 DIS3LQ8TF46 1054 aaKnown RBP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 USP6NLQ92738 828 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 HES6Q96HZ4 224 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.78□□□□□ -1.322e-6■■■■□ 20.5
SF3A3-208ENST00000489537 PARD6BQ9BYG5 372 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 GPR88Q9GZN0 384 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 RAB17Q9H0T7 212 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 TSPYL1Q9H0U9 437 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 RNPEPQ9H4A4 650 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 BCAS3Q9H6U6 928 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 PDE11AQ9HCR9 933 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 PDGFCQ9NRA1 345 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 TMEM51Q9NW97 253 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 PARP2Q9UGN5 583 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 PUF60Q9UHX1 559 aaKnown RBP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 GJD2Q9UKL4 321 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 GNEQ9Y223 722 aaKnown RBP6.78□□□□□ -1.32
SF3A3-208ENST00000489537 PCDHB4Q9Y5E5 795 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 CAPN6Q9Y6Q1 641 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 ALPK3Q96L96 1907 aa6.78□□□□□ -1.32
SF3A3-208ENST00000489537 COL6A3P12111 3177 aa6.77□□□□□ -1.32
SF3A3-208ENST00000489537 C17orf102A2RUQ5 167 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 SOBPA7XYQ1 873 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 TISP43B9A030 160 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PODXLO00592 558 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 KCNK3O14649 394 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 ENC1O14682 589 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CYP26A1O43174 497 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 DYNC1LI2O43237 492 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 SORBS3O60504 671 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CAND2O75155 1236 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF189O75820 626 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CYP2C9P11712 490 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 SKIP12755 728 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CYP3A5P20815 502 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 GNA15P30679 374 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 GRK4P32298 578 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CLCN3P51790 818 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 CRYBB1P53674 252 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 EPHB4P54760 987 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PRMT2P55345 433 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 TFAMQ00059 246 aaKnown RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 LMNB2Q03252 620 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PTPN11Q06124 597 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-208ENST00000489537 PTP4A2Q12974 167 aa6.77□□□□□ -1.33
SF3A3-208ENST00000489537 DHX34Q14147 1143 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms