RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 L1RE1Q9UN81 338 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 TFR2Q9UP52 801 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 MICAL3Q7RTP6 2002 aa22.26■■□□□ 1.15
SND1-214ENST00000489417 CYB561D2O14569 222 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 PJA2O43164 708 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 FAM163BP0C2L3 166 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 BRD2P25440 801 aaKnown RBP22.25■■□□□ 1.15
SND1-214ENST00000489417 GATMP50440 423 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 KIF5AQ12840 1032 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 DCLRE1AQ6PJP8 1040 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 DSTYKQ6XUX3 929 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 NYAP1Q6ZVC0 841 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 UNC93AQ86WB7 457 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 COLGALT2Q8IYK4 626 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 ZNF606Q8WXB4 792 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 SENP8Q96LD8 212 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 C16orf45Q96MC5 204 aaPredicted RBP22.25■■□□□ 1.15
SND1-214ENST00000489417 NT5C1AQ9BXI3 368 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 LACRTQ9GZZ8 138 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 PDCL3Q9H2J4 239 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 PRKAG2Q9UGJ0 569 aa22.25■■□□□ 1.15
SND1-214ENST00000489417 TMCO5BA8MYB1 307 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 KRT86O43790 486 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 B4GALT3O60512 393 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 EFCAB14O75071 495 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 H2AFZP0C0S5 128 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 GZMAP12544 262 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 CD19P15391 556 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 AARSP49588 968 aaKnown RBP eCLIP22.24■■□□□ 1.15
SND1-214ENST00000489417 ORC1Q13415 861 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 PTPN14Q15678 1187 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 CLEC16AQ2KHT3 1053 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 TRIM72Q6ZMU5 477 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 H2AFVQ71UI9 128 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 ADGRF2Q8IZF7 708 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 OR6B3Q8NGW1 331 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 KBTBD7Q8WVZ9 684 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 PACSIN1Q9BY11 444 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 MRPL9Q9BYD2 267 aaKnown RBP22.24■■□□□ 1.15
SND1-214ENST00000489417 SNX25Q9H3E2 840 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 IL23AQ9NPF7 189 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 TAS2R14Q9NYV8 317 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 INTUQ9ULD6 942 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 LTBP2Q14767 1821 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 TTC3P53804 2025 aa22.24■■□□□ 1.15
SND1-214ENST00000489417 TBKBP1A7MCY6 615 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 MED7O43513 233 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 B3GAT3O94766 335 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 ABL1P00519 1130 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 WARSP23381 471 aaKnown RBP22.23■■□□□ 1.15
SND1-214ENST00000489417 CD300LGQ6UXG3 332 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 PDCL2Q8N4E4 241 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 TFAP2BQ92481 460 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 ZSWIM1Q9BR11 485 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 TRIM10Q9UDY6 481 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 KIAA1257Q9ULG3 409 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 ALPK3Q96L96 1907 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 RTN2O75298 545 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 AMHP03971 560 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 ACRP10323 421 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 VDRP11473 427 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 GNL1P36915 607 aaPredicted RBP22.23■■□□□ 1.15
SND1-214ENST00000489417 TIGD5Q53EQ6 642 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 DNAAF5Q86Y56 855 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 C7orf61Q8IZ16 206 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 HEXIM2Q96MH2 286 aaKnown RBP22.23■■□□□ 1.15
SND1-214ENST00000489417 DNAI2Q9GZS0 605 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 ISCUQ9H1K1 167 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 GUCA1BQ9UMX6 200 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 NME7Q9Y5B8 376 aa22.23■■□□□ 1.15
SND1-214ENST00000489417 A8MXQ7 604 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 UPP2O95045 317 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 KIF4AO95239 1232 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 CYP1A1P04798 512 aaPredicted RBP22.22■■□□□ 1.15
SND1-214ENST00000489417 CFHP08603 1231 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 OR1G1P47890 313 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 GALCP54803 685 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 PPIGQ13427 754 aaKnown RBP eCLIP22.22■■□□□ 1.15
SND1-214ENST00000489417 PAN2Q504Q3 1202 aaKnown RBP22.22■■□□□ 1.15
SND1-214ENST00000489417 WSCD1Q658N2 575 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 OSTM1Q86WC4 334 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 TMEM86AQ8N2M4 240 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 NRDE2Q9H7Z3 1164 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 DNAJB4Q9UDY4 337 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 PCDHGC3Q9UN70 934 aa22.22■■□□□ 1.15
SND1-214ENST00000489417 TMEM189-UBE2V1I3L0A0 370 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 KIF2AO00139 706 aaPredicted RBP22.21■■□□□ 1.15
SND1-214ENST00000489417 BAIAP3O94812 1187 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 FTLP02792 175 aaPredicted RBP22.21■■□□□ 1.15
SND1-214ENST00000489417 TMEM253P0C7T8 217 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 ODC1P11926 461 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 UNGP13051 313 aaPredicted RBP22.21■■□□□ 1.15
SND1-214ENST00000489417 SSTR3P32745 418 aaPredicted RBP22.21■■□□□ 1.15
SND1-214ENST00000489417 BRCC3P46736 316 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 SGO2Q562F6 1265 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 ACAD10Q6JQN1 1059 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 PASD1Q8IV76 773 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 HASPINQ8TF76 798 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 CYFIP2Q96F07 1278 aa22.21■■□□□ 1.15
SND1-214ENST00000489417 ANKRD62A6NC57 917 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms