RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 WDR49Q8IV35 697 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 NPAS3Q8IXF0 933 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 PDCL2Q8N4E4 241 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 TTC9BQ8N6N2 239 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 CCDC127Q96BQ5 260 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 TCEAL4Q96EI5 215 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 CORO1BQ9BR76 489 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 L1RE1Q9UN81 338 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 DUSP12Q9UNI6 340 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 SLC27A5Q9Y2P5 690 aa22.79■■□□□ 1.24
LIME1-207ENST00000489212 MRPS23Q9Y3D9 190 aaKnown RBP22.79■■□□□ 1.24
LIME1-207ENST00000489212 ZFP37Q9Y6Q3 630 aaPredicted RBP22.79■■□□□ 1.24
LIME1-207ENST00000489212 RHOBTB3O94955 611 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 TNNC2P02585 160 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 DLATP10515 647 aaKnown RBP22.78■■□□□ 1.24
LIME1-207ENST00000489212 CCR2P41597 374 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 SLC39A12Q504Y0 691 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 HS6ST3Q8IZP7 471 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 FMR1NBQ8N0W7 255 aaPredicted RBP22.78■■□□□ 1.24
LIME1-207ENST00000489212 SLC44A3Q8N4M1 653 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 PLEKHO2Q8TD55 490 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 FGF14Q92915 247 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 MFSD14AQ96MC6 490 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 CGRRF1Q99675 332 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 RPP25Q9BUL9 199 aaKnown RBP22.78■■□□□ 1.24
LIME1-207ENST00000489212 DNAJC25Q9H1X3 360 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 DMAC2Q9NW81 257 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 NUMBLQ9Y6R0 609 aa22.78■■□□□ 1.24
LIME1-207ENST00000489212 EXOC3O60645 756 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 CEBPBP17676 345 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 PARM1Q6UWI2 310 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 TRAPPC11Q7Z392 1133 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 THEM5Q8N1Q8 247 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 GOLGA5Q8TBA6 731 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 NXPE3Q969Y0 559 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 GDAP2Q9NXN4 497 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 HCN4Q9Y3Q4 1203 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 SNX9Q9Y5X1 595 aa22.77■■□□□ 1.24
LIME1-207ENST00000489212 SOAT2O75908 522 aa22.76■■□□□ 1.23
LIME1-207ENST00000489212 TNNI1P19237 187 aa22.76■■□□□ 1.23
LIME1-207ENST00000489212 CASP4P49662 377 aa22.76■■□□□ 1.23
LIME1-207ENST00000489212 SNW1Q13573 536 aaKnown RBP22.76■■□□□ 1.23
LIME1-207ENST00000489212 OSTM1Q86WC4 334 aa22.76■■□□□ 1.23
LIME1-207ENST00000489212 FBXL6Q8N531 539 aa22.76■■□□□ 1.23
LIME1-207ENST00000489212 ENGASEQ8NFI3 743 aa22.76■■□□□ 1.23
LIME1-207ENST00000489212 ZNF516Q92618 1163 aa22.76■■□□□ 1.23
LIME1-207ENST00000489212 ZNF512Q96ME7 567 aaPredicted RBP22.76■■□□□ 1.23
LIME1-207ENST00000489212 FNBP1Q96RU3 617 aa22.76■■□□□ 1.23
LIME1-207ENST00000489212 PDXKO00764 312 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 HUS1O60921 280 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 MOSPD3O75425 235 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 KCNB1Q14721 858 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 SLC9A9Q8IVB4 645 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 ELMOD1Q8N336 334 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 TMEM174Q8WUU8 243 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 MCRS1Q96EZ8 462 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 HPDLQ96IR7 371 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 LRRC3Q9BY71 257 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 TMLHEQ9NVH6 421 aa22.75■■□□□ 1.23
LIME1-207ENST00000489212 HCRTO43612 131 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 PRPF40AO75400 957 aaKnown RBP22.74■■□□□ 1.23
LIME1-207ENST00000489212 CST3P01034 146 aaPredicted RBP22.74■■□□□ 1.23
LIME1-207ENST00000489212 EPHA5P54756 1037 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 MYO1EQ12965 1108 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 PNOCQ13519 176 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 SOWAHAQ2M3V2 549 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 IQCEQ6IPM2 695 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 PDZD4Q76G19 769 aaPredicted RBP22.74■■□□□ 1.23
LIME1-207ENST00000489212 LIMS2Q7Z4I7 341 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 TMEM86AQ8N2M4 240 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 TOP6BLQ8N6T0 577 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 CCDC47Q96A33 483 aaKnown RBP22.74■■□□□ 1.23
LIME1-207ENST00000489212 DDX43Q9NXZ2 648 aaKnown RBP22.74■■□□□ 1.23
LIME1-207ENST00000489212 HSFX1Q9UBD0 423 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 MAPK8IP1Q9UQF2 711 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 KMT2EQ8IZD2 1858 aa22.74■■□□□ 1.23
LIME1-207ENST00000489212 GOLGA6L4A6NEF3 574 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 NR3C1P04150 777 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 GJA1P17302 382 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 ACAT1P24752 427 aaKnown RBP22.73■■□□□ 1.23
LIME1-207ENST00000489212 ALDH1A3P47895 512 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 EPHB3P54753 998 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 VCPP55072 806 aaKnown RBP22.73■■□□□ 1.23
LIME1-207ENST00000489212 PLD1Q13393 1074 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 CYP4A22Q5TCH4 519 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 TMC8Q8IU68 726 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 SUGP1Q8IWZ8 645 aaKnown RBP22.73■■□□□ 1.23
LIME1-207ENST00000489212 ADGRF2Q8IZF7 708 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 ASAH2Q9NR71 780 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 GDE1Q9NZC3 331 aa22.73■■□□□ 1.23
LIME1-207ENST00000489212 R3HCC1Q9Y3T6 440 aaKnown RBP22.73■■□□□ 1.23
LIME1-207ENST00000489212 ZNF197O14709 1029 aa22.72■■□□□ 1.23
LIME1-207ENST00000489212 GABRDO14764 452 aa22.72■■□□□ 1.23
LIME1-207ENST00000489212 MICAL2O94851 1124 aa22.72■■□□□ 1.23
LIME1-207ENST00000489212 CFHP08603 1231 aa22.72■■□□□ 1.23
LIME1-207ENST00000489212 SRFP11831 508 aa22.72■■□□□ 1.23
LIME1-207ENST00000489212 MYL4P12829 197 aa22.72■■□□□ 1.23
LIME1-207ENST00000489212 CCDC142Q17RM4 750 aa22.72■■□□□ 1.23
LIME1-207ENST00000489212 MTSS1LQ765P7 747 aa22.72■■□□□ 1.23
LIME1-207ENST00000489212 DCP1BQ8IZD4 617 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms