RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ELP3Q9H9T3 547 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 NYAP2Q9P242 653 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 PHTF1Q9UMS5 762 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 MADDQ8WXG6 1647 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 RSPH10B2B2RC85 870 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 AP5Z1O43299 807 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 RSPH10BP0C881 870 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 ADRA2BP18089 450 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 PON1P27169 355 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 GRB10Q13322 594 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 ZSWIM1Q9BR11 485 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 KDM4CQ9H3R0 1056 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 L2HGDHQ9H9P8 463 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 TNS3Q68CZ2 1445 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.39■□□□□ 0.54
NPHP4-209ENST00000489180 TRIM49D1C9J1S8 452 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 CTCFP49711 727 aaPredicted RBP18.39■□□□□ 0.54
NPHP4-209ENST00000489180 BLVRAP53004 296 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 HERVK_113P62684 666 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 ORC1Q13415 861 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 CCDC33Q8N5R6 958 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 MED15Q96RN5 788 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 MXRA8Q9BRK3 442 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 RSAD1Q9HA92 442 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 HAO1Q9UJM8 370 aa18.39■□□□□ 0.54
NPHP4-209ENST00000489180 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 ZBTB7AO95365 584 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 POLBP06746 335 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 CTSHP09668 335 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 MFN1Q8IWA4 741 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 SLC39A10Q9ULF5 831 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 ABCA6Q8N139 1617 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 DPYSL4O14531 572 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 MAP3K6O95382 1288 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 FBXW4P57775 412 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 SGF29Q96ES7 293 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 CNBD2Q96M20 576 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 CCDC134Q9H6E4 229 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.39■□□□□ 0.534e-6■■■■■ 28.1
NPHP4-209ENST00000489180 ASB14A6NK59 587 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 EXTL3O43909 919 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 APOA1P02647 267 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 SERPINB3P29508 390 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 CASP4P49662 377 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 COG2Q14746 738 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 DCAF6Q58WW2 860 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 PLD3Q8IV08 490 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 TRPC7Q9HCX4 862 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 PALMDQ9NP74 551 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 HPS4Q9NQG7 708 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 GRID1Q9ULK0 1009 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 ATP6V1B1P15313 513 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 SERPINB10P48595 397 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 MRPS15P82914 257 aaKnown RBP18.39■□□□□ 0.53
NPHP4-209ENST00000489180 POTEAQ6S8J7 498 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 CDR2LQ86X02 465 aaPredicted RBP18.39■□□□□ 0.53
NPHP4-209ENST00000489180 DNAAF5Q86Y56 855 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 EFHBQ8N7U6 833 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 TSPAN17Q96FV3 270 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 ZFYVE19Q96K21 471 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 MOV10L1Q9BXT6 1211 aaKnown RBP18.39■□□□□ 0.53
NPHP4-209ENST00000489180 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.39■□□□□ 0.53
NPHP4-209ENST00000489180 CD274Q9NZQ7 290 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 NAGPAQ9UK23 515 aa18.39■□□□□ 0.53
NPHP4-209ENST00000489180 FDX1P10109 184 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 ATF7IP2Q5U623 682 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 MYCBPAPQ8TBZ2 947 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 CCT7Q99832 543 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
NPHP4-209ENST00000489180 TBC1D4O60343 1298 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 NDUFS3O75489 264 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 LRRC74AQ0VAA2 488 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 MAPK7Q13164 816 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 UGP2Q16851 508 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 COL23A1Q86Y22 540 aaPredicted RBP18.38■□□□□ 0.53
NPHP4-209ENST00000489180 FAM162AQ96A26 154 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 OVOS2A0A0J9YW53 1432 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 OVOS2Q6IE36 1432 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 FOXN3O00409 490 aaPredicted RBP18.38■□□□□ 0.53
NPHP4-209ENST00000489180 AVPR1AP37288 418 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 WNK4Q96J92 1243 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 SERPINB12Q96P63 405 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 TRIM62Q9BVG3 475 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 NT5C1AQ9BXI3 368 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 AGPAT3Q9NRZ7 376 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 H3BQF6 201 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 ZNF197O14709 1029 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 ETFBP38117 255 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 STILQ15468 1287 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 ACAD10Q6JQN1 1059 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 ZNF669Q96BR6 464 aaPredicted RBP18.38■□□□□ 0.53
NPHP4-209ENST00000489180 C17orf80Q9BSJ5 609 aa18.38■□□□□ 0.53
NPHP4-209ENST00000489180 ZC3H4Q9UPT8 1303 aaKnown RBP18.38■□□□□ 0.53
NPHP4-209ENST00000489180 REREQ9P2R6 1566 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 SERPIND1P05546 499 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 IL31Q6EBC2 164 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms