RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 GPR25O00155 361 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 GAS2O43903 313 aaKnown RBP19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 VNN1O95497 513 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 VIMP08670 466 aaKnown RBP19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 CXCL8P10145 99 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 PIK3CAP42336 1068 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 PSMD6Q15008 389 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 FSCN1Q16658 493 aaKnown RBP19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 KCTD16Q68DU8 428 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 CXCL17Q6UXB2 119 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 LNX1Q8TBB1 728 aaPredicted RBP19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 DNAJB3Q8WWF6 145 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 SYN2Q92777 582 aaPredicted RBP19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 ANKRD27Q96NW4 1050 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 FZD8Q9H461 694 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 GOLPH3Q9H4A6 298 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 TAS2R14Q9NYV8 317 aa19.32■□□□□ 0.68
POLR2J3-205ENST00000489144 ACKR2O00590 384 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 MAPK13O15264 365 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 CYP26A1O43174 497 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 SRGAP2O75044 1071 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 F2P00734 622 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 MYBL1P10243 752 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 NAT1P18440 290 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 NR1D1P20393 614 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 CCND3P30281 292 aaPredicted RBP19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 SLC18A3Q16572 532 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 SLFN12LQ6IEE8 588 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 ARL10Q8N8L6 244 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 TMC2Q8TDI7 906 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 MAIP1Q8WWC4 291 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 CCT6BQ92526 530 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 CDT1Q9H211 546 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 SSU72P8A0A1W2PR75 194 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 DDX3XO00571 662 aaKnown RBP eCLIP19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 SGPL1O95470 568 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 HLA-DRAP01903 254 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 HOXD8P13378 290 aaPredicted RBP19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 TMOD1P28289 359 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 PHKA2P46019 1235 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 NOGQ13253 232 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 MAATS1Q7Z4T9 603 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 CXCL16Q9H2A7 254 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 TSKSQ9UJT2 592 aa19.31■□□□□ 0.68
POLR2J3-205ENST00000489144 KRT86O43790 486 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 E2F6O75461 281 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 UPP2O95045 317 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 ATP1A1P05023 1023 aaKnown RBP19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 ALADP13716 330 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 DESP17661 470 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 ARF4P18085 180 aaPredicted RBP19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 CCND1P24385 295 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 PSEN2P49810 448 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 GPC3P51654 580 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 TFAMQ00059 246 aaKnown RBP19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 GNASQ5JWF2 1037 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 ZPBP2Q6X784 338 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 SLC47A2Q86VL8 602 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 OLIG1Q8TAK6 271 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 CD99L2Q8TCZ2 262 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 HELQQ8TDG4 1101 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 SEC16BQ96JE7 1060 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 ARPC5LQ9BPX5 153 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 C2orf40Q9H1Z8 148 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 GALNT8Q9NY28 637 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 MYH10P35580 1976 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 MAGEB2O15479 319 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 CST3P01034 146 aaPredicted RBP19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 CLTAP09496 248 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 CYP2C9P11712 490 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 CCNG1P51959 295 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 CKAP4Q07065 602 aaKnown RBP19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 LBRQ14739 615 aaKnown RBP19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 AMHR2Q16671 573 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 MPZL3Q6UWV2 235 aa19.3■□□□□ 0.68
POLR2J3-205ENST00000489144 GMNCA6NCL1 334 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 NCK2O43639 380 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 ATP2C2O75185 946 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 C4BPAP04003 597 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 KRT5P13647 590 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 ABCB4P21439 1286 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 MRPS35P82673 323 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 CACNB2Q08289 660 aaPredicted RBP19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 CACNA2D3Q8IZS8 1091 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 CCDC63Q8NA47 563 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 APOBEC3GQ9HC16 384 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 ATXN10Q9UBB4 475 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 OGTO15294 1046 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 MYCP01106 439 aaPredicted RBP19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 PENKP01210 267 aaPredicted RBP19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 GUCY2FP51841 1108 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 TMED1Q13445 227 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 ZNF268Q14587 947 aaPredicted RBP19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 GLE1Q53GS7 698 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 LCA5Q86VQ0 697 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 RUBCNQ92622 972 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 NT5C1BQ96P26 610 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 PTPRHQ9HD43 1115 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 NAGPAQ9UK23 515 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 FBXL5Q9UKA1 691 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms