RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 KIAA1586Q9HCI6 787 aa26.93■■□□□ 1.9
HMGN1-217ENST00000489072 NPR3P17342 541 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 SYKP43405 635 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 SNRPFP62306 86 aaKnown RBP26.92■■□□□ 1.9
HMGN1-217ENST00000489072 BFSP1Q12934 665 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 STK4Q13043 487 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 SNRNP35Q16560 246 aaKnown RBP26.92■■□□□ 1.9
HMGN1-217ENST00000489072 KMT5BQ4FZB7 885 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 SLC39A12Q504Y0 691 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 IQCEQ6IPM2 695 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 MTSS1LQ765P7 747 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 PDZD4Q76G19 769 aaPredicted RBP26.92■■□□□ 1.9
HMGN1-217ENST00000489072 LRRTM3Q86VH5 581 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 SIX5Q8N196 739 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 RDH13Q8NBN7 331 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 KIAA0895Q8NCT3 520 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 MFSD1Q9H3U5 465 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 GOLPH3LQ9H4A5 285 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 EXOC1Q9NV70 894 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 GDE1Q9NZC3 331 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 L1RE1Q9UN81 338 aa26.92■■□□□ 1.9
HMGN1-217ENST00000489072 KRBA1A5PL33 1030 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 MOSPD3O75425 235 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 SOAT2O75908 522 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 KRT19P08727 400 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 EPHA5P54756 1037 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 RBP5P82980 135 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 SURF1Q15526 300 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 KNOP1Q1ED39 458 aaKnown RBP26.91■■□□□ 1.9
HMGN1-217ENST00000489072 CWF19L1Q69YN2 538 aaKnown RBP26.91■■□□□ 1.9
HMGN1-217ENST00000489072 HS2ST1Q7LGA3 356 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 THEM5Q8N1Q8 247 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 PDCL2Q8N4E4 241 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 TMEM105Q8N8V8 129 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 FSIP1Q8NA03 581 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 XXYLT1Q8NBI6 393 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 GPR152Q8TDT2 470 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 ANKRD36BP1Q96IX9 119 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 KXD1Q9BQD3 176 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 WNT16Q9UBV4 365 aa26.91■■□□□ 1.9
HMGN1-217ENST00000489072 A0A1W2PQ27 194 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 A0A1W2PQ64 194 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 A0A1W2PQD8 194 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 ZNF197O14709 1029 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 CYP4A22Q5TCH4 519 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 ASTLQ6HA08 431 aaPredicted RBP26.9■■□□□ 1.9
HMGN1-217ENST00000489072 C12orf56Q8IXR9 622 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 FLCNQ8NFG4 579 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 LRRC3Q9BY71 257 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 ASAH2Q9NR71 780 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 SLC2A4RGQ9NR83 387 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 CA14Q9ULX7 337 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 PIEZO1Q92508 2521 aa26.9■■□□□ 1.9
HMGN1-217ENST00000489072 MICAL2O94851 1124 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 PRR29P0C7W0 189 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 MYL4P12829 197 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 GPC5P78333 572 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 CYP24A1Q07973 514 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 PLD1Q13393 1074 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 DUOXA2Q1HG44 320 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 TMC8Q8IU68 726 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 WDR49Q8IV35 697 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 GZF1Q9H116 711 aaPredicted RBP26.89■■□□□ 1.9
HMGN1-217ENST00000489072 GDAP2Q9NXN4 497 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 CGNQ9P2M7 1197 aaKnown RBP26.89■■□□□ 1.9
HMGN1-217ENST00000489072 HSFX1Q9UBD0 423 aa26.89■■□□□ 1.9
HMGN1-217ENST00000489072 TNNC2P02585 160 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 MYL1P05976 194 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 GJA1P17302 382 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 ALDH1A3P47895 512 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 EPHB3P54753 998 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 PSMD2Q13200 908 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 PSMD6Q15008 389 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 LEMD2Q8NC56 503 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 PLA2G2FQ9BZM2 168 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 TMLHEQ9NVH6 421 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 SNX9Q9Y5X1 595 aa26.88■■□□□ 1.89
HMGN1-217ENST00000489072 HUS1O60921 280 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 RPN1P04843 607 aaKnown RBP26.87■■□□□ 1.89
HMGN1-217ENST00000489072 DLATP10515 647 aaKnown RBP26.87■■□□□ 1.89
HMGN1-217ENST00000489072 FCARP24071 287 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 CLCN5P51795 746 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 NHLH1Q02575 133 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 TCF15Q12870 199 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 OSTM1Q86WC4 334 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 SHKBP1Q8TBC3 707 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 ZSWIM3Q96MP5 696 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 CGRRF1Q99675 332 aa26.87■■□□□ 1.89
HMGN1-217ENST00000489072 PI15O43692 258 aa26.86■■□□□ 1.89
HMGN1-217ENST00000489072 FAM78AQ5JUQ0 283 aa26.86■■□□□ 1.89
HMGN1-217ENST00000489072 TANGO2Q6ICL3 276 aa26.86■■□□□ 1.89
HMGN1-217ENST00000489072 KRBA2Q6ZNG9 492 aa26.86■■□□□ 1.89
HMGN1-217ENST00000489072 TRAPPC11Q7Z392 1133 aa26.86■■□□□ 1.89
HMGN1-217ENST00000489072 CCDC127Q96BQ5 260 aa26.86■■□□□ 1.89
HMGN1-217ENST00000489072 HPDLQ96IR7 371 aa26.86■■□□□ 1.89
HMGN1-217ENST00000489072 SEPT5Q99719 369 aaPredicted RBP26.86■■□□□ 1.89
HMGN1-217ENST00000489072 KCTD10Q9H3F6 313 aa26.86■■□□□ 1.89
HMGN1-217ENST00000489072 ZNF334Q9HCZ1 680 aaPredicted RBP26.86■■□□□ 1.89
HMGN1-217ENST00000489072 ECI2O75521 394 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 ATF6P18850 670 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms