RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 ZNF667Q5HYK9 610 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 SPOPLQ6IQ16 392 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 C12orf76Q8N812 135 aaPredicted RBP16.26■□□□□ 0.19
FDPS-213ENST00000489003 KREMEN2Q8NCW0 462 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 OR10T2Q8NGX3 314 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 KBTBD7Q8WVZ9 684 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 TAF4BQ92750 862 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 CNOT6LQ96LI5 555 aaKnown RBP16.26■□□□□ 0.19
FDPS-213ENST00000489003 TMEM209Q96SK2 561 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 MRPL45Q9BRJ2 306 aaKnown RBP16.26■□□□□ 0.19
FDPS-213ENST00000489003 APOBEC3GQ9HC16 384 aaKnown RBP16.26■□□□□ 0.19
FDPS-213ENST00000489003 RAB20Q9NX57 234 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 TSC2P49815 1807 aa16.26■□□□□ 0.19
FDPS-213ENST00000489003 SYCE3A1L190 88 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 WDR27A2RRH5 827 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 PMM2O15305 246 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 PIK3CAP42336 1068 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 LHX1P48742 406 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 FMO5P49326 533 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 CDH8P55286 799 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 TNNC1P63316 161 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 GPR17Q13304 367 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 ZNF699Q32M78 642 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 LRRTM3Q86VH5 581 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 FBXL13Q8NEE6 735 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.25■□□□□ 0.19
FDPS-213ENST00000489003 SPATA18Q8TC71 538 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 HDAC7Q8WUI4 952 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 ZCWPW1Q9H0M4 648 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 S1PR5Q9H228 398 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 PLEKHA4Q9H4M7 779 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.25■□□□□ 0.196e-8■■■■■ 108.4
FDPS-213ENST00000489003 DDX43Q9NXZ2 648 aaKnown RBP16.25■□□□□ 0.19
FDPS-213ENST00000489003 FBXW11Q9UKB1 542 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 NFE2L3Q9Y4A8 694 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 NME7Q9Y5B8 376 aa16.25■□□□□ 0.19
FDPS-213ENST00000489003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.25■□□□□ 0.19
FDPS-213ENST00000489003 HCRTO43612 131 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 TACC1O75410 805 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 SRGAP2BP0DMP2 458 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 HOXB8P17481 243 aaPredicted RBP16.24■□□□□ 0.19
FDPS-213ENST00000489003 WARSP23381 471 aaKnown RBP16.24■□□□□ 0.19
FDPS-213ENST00000489003 LMO2P25791 158 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 GNL1P36915 607 aaPredicted RBP16.24■□□□□ 0.19
FDPS-213ENST00000489003 MYL7Q01449 175 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 CLUL1Q15846 466 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 LEXMQ3ZCV2 418 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 HSP90AA4PQ58FG1 418 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 TPGS2Q68CL5 300 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 RNF19BQ6ZMZ0 732 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 ADGRF2Q8IZF7 708 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 FEZF2Q8TBJ5 459 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 TATDN2Q93075 761 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 ACBD6Q9BR61 282 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 APOL5Q9BWW9 433 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 SDCBP2Q9H190 292 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 MAN1C1Q9NR34 630 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 DZANK1Q9NVP4 752 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 AFF4Q9UHB7 1163 aaKnown RBP16.24■□□□□ 0.19
FDPS-213ENST00000489003 DPP7Q9UHL4 492 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 CD207Q9UJ71 328 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 COL6A3P12111 3177 aa16.24■□□□□ 0.19
FDPS-213ENST00000489003 EYSQ5T1H1 3165 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 P4HA2O15460 535 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 SEC24AO95486 1093 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 VNN2O95498 520 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 AFPP02771 609 aaKnown RBP16.23■□□□□ 0.19
FDPS-213ENST00000489003 PDGFRBP09619 1106 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 ATF2P15336 505 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 ACAT1P24752 427 aaKnown RBP16.23■□□□□ 0.19
FDPS-213ENST00000489003 MTIF2P46199 727 aaKnown RBP16.23■□□□□ 0.19
FDPS-213ENST00000489003 ADCY1Q08828 1119 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 NCAPHQ15003 741 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 UVSSAQ2YD98 709 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 FAM114A1Q8IWE2 563 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 OR6B3Q8NGW1 331 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 LMO3Q8TAP4 145 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 SMYD3Q9H7B4 428 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 FANCLQ9NW38 375 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 THEGQ9P2T0 379 aa16.23■□□□□ 0.19
FDPS-213ENST00000489003 CCDC195A0A1B0GUA6 201 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 N4BP1O75113 896 aaKnown RBP16.22■□□□□ 0.19
FDPS-213ENST00000489003 RFPL2O75678 378 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 ZMYND10O75800 440 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 WEE2P0C1S8 567 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 CPB1P15086 417 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 RAP1GAPP47736 663 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 NOP14P78316 857 aaKnown RBP16.22■□□□□ 0.19
FDPS-213ENST00000489003 ZSCAN23Q3MJ62 389 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 DCP1BQ8IZD4 617 aaKnown RBP16.22■□□□□ 0.19
FDPS-213ENST00000489003 CCDC150Q8NCX0 1101 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 ATXN2LQ8WWM7 1075 aaKnown RBP16.22■□□□□ 0.19
FDPS-213ENST00000489003 PGLYRP2Q96PD5 576 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 BCO2Q9BYV7 579 aa16.22■□□□□ 0.19
FDPS-213ENST00000489003 NAT10Q9H0A0 1025 aaKnown RBP16.22■□□□□ 0.19
FDPS-213ENST00000489003 ADAM7Q9H2U9 754 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms