RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ELSPBP1Q96BH3 223 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 SPATA32Q96LK8 384 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 GPR88Q9GZN0 384 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 ZCWPW1Q9H0M4 648 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 TBC1D17Q9HA65 648 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 HSPBP1Q9NZL4 362 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 CGNQ9P2M7 1197 aaKnown RBP14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 USP25Q9UHP3 1055 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 AGAP1Q9UPQ3 857 aa14.88□□□□□ -0.03
SPTLC1-207ENST00000488921 HUS1O60921 280 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 TNNC2P02585 160 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 KRT19P08727 400 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 SLFN14P0C7P3 912 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 MYL4P12829 197 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 AFMP43652 599 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 WNT7BP56706 349 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 RBP5P82980 135 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 TSPY1Q01534 308 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 EHHADHQ08426 723 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 MYO1EQ12965 1108 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 VEPH1Q14D04 833 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 WSCD1Q658N2 575 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 DCP1BQ8IZD4 617 aaKnown RBP14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 TMEM86AQ8N2M4 240 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 CSGALNACT2Q8N6G5 542 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 ST13P5Q8NFI4 369 aaPredicted RBP14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 TCEAL4Q96EI5 215 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 BORCS6Q96GS4 357 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 RPP25Q9BUL9 199 aaKnown RBP14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 MTMR12Q9C0I1 747 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 BLZF1Q9H2G9 400 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 ZFP14Q9HCL3 533 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 PDE11AQ9HCR9 933 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 DENND4CQ5VZ89 1909 aa14.87□□□□□ -0.03
SPTLC1-207ENST00000488921 TICRRQ7Z2Z1 1910 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 PRPF40AO75400 957 aaKnown RBP14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 MYL1P05976 194 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 HOXD13P35453 343 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 CCR2P41597 374 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 MRE11P49959 708 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 GPC5P78333 572 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 MYL7Q01449 175 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 PRKCQQ04759 706 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 BFSP1Q12934 665 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 CUL4BQ13620 913 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 SNRNP35Q16560 246 aaKnown RBP14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 BMT2Q1RMZ1 405 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 CBWD2Q8IUF1 395 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 WDR49Q8IV35 697 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 CCDC105Q8IYK2 499 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 HS6ST3Q8IZP7 471 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 ATAD1Q8NBU5 361 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 LEO1Q8WVC0 666 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 SCFD1Q8WVM8 642 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 ATOH1Q92858 354 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 SMARCD2Q92925 531 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 PSMG2Q969U7 264 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 TMEM209Q96SK2 561 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 SEPT5Q99719 369 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 CRISPLD1Q9H336 500 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 SLITRK6Q9H5Y7 841 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 AGPAT3Q9NRZ7 376 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 INTS13Q9NVM9 706 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 GDAP2Q9NXN4 497 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 SERTAD1Q9UHV2 236 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 SLC27A5Q9Y2P5 690 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 OBSL1O75147 1896 aa14.86□□□□□ -0.03
SPTLC1-207ENST00000488921 TGFB1I1O43294 461 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 ACTN4O43707 911 aaKnown RBP14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 PFKFB1P16118 471 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 CMA1P23946 247 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 CASP1P29466 404 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 STARD6P59095 220 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 MLF2Q15773 248 aaPredicted RBP14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 NFE2Q16621 373 aaPredicted RBP14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 DUOXA2Q1HG44 320 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 MGAT5BQ3V5L5 792 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 ALYREFQ86V81 257 aaKnown RBP14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 TMC8Q8IU68 726 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 NELFCDQ8IXH7 590 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 PDCL2Q8N4E4 241 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 TOP6BLQ8N6T0 577 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 XXYLT1Q8NBI6 393 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 GOLGA5Q8TBA6 731 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 FAM200AQ8TCP9 573 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 DEPDC1BQ8WUY9 529 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 DNASE1L2Q92874 299 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 E2F7Q96AV8 911 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 GCNAQ96QF7 691 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 FNBP1Q96RU3 617 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 SCAND2PQ9GZW5 306 aaPredicted RBP14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 DNAJC25Q9H1X3 360 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 SLC39A2Q9NP94 309 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 EXOC1Q9NV70 894 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 L1RE1Q9UN81 338 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 PCDHB5Q9Y5E4 795 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 COL4A2P08572 1712 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 PATJQ8NI35 1801 aa14.85□□□□□ -0.03
SPTLC1-207ENST00000488921 ZNF638Q14966 1978 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms