RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SHKBP1Q8TBC3 707 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 CACTINQ8WUQ7 758 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 SMARCD2Q92925 531 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 ASB16Q96NS5 453 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 LRRC3Q9BY71 257 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 ZCWPW1Q9H0M4 648 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 MTF2Q9Y483 593 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
CCHCR1-215ENST00000488920 A0A1W2PRU2 124 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 KANSL1LA0AUZ9 987 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 FAM170BA6NMN3 283 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 ITGB3P05106 788 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 GLULP15104 373 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 CASP1P29466 404 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 NBL1P41271 181 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 PRKCQQ04759 706 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 DNM1Q05193 864 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 UBXN2BQ14CS0 331 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 MGAT5BQ3V5L5 792 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 STXBP4Q6ZWJ1 553 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 TMC8Q8IU68 726 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 C1orf127Q8N9H9 656 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 ZSCAN18Q8TBC5 510 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 FAM200AQ8TCP9 573 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 KCNG4Q8TDN1 519 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 ZNF560Q96MR9 790 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 SEPT5Q99719 369 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 TRMT61BQ9BVS5 477 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 SLITRK6Q9H5Y7 841 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 ZNF334Q9HCZ1 680 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 DLGAP2Q9P1A6 1054 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 GTF3C3Q9Y5Q9 886 aa12.87□□□□□ -0.35
CCHCR1-215ENST00000488920 CACNA1HO95180 2353 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 PROB1E7EW31 1015 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 KRT19P08727 400 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 PNPLA4P41247 253 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 TUFMP49411 452 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 BFSP1Q12934 665 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 STXBP5Q5T5C0 1151 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 CNNM4Q6P4Q7 775 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 VITQ6UXI7 678 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 TPRG1Q6ZUI0 275 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 ASCL5Q7RTU5 278 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 CBWD2Q8IUF1 395 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 GPD1LQ8N335 351 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 CXorf38Q8TB03 319 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 GIPC2Q8TF65 315 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 PSMG2Q969U7 264 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 LPIN3Q9BQK8 851 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 HEBP1Q9NRV9 189 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 ABI2Q9NYB9 513 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 CFAP45Q9UL16 551 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 ASB3Q9Y575 518 aa12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 PDCD11Q14690 1871 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-215ENST00000488920 ZFHX2Q9C0A1 2572 aaPredicted RBP12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 USP34Q70CQ2 3546 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 HUS1O60921 280 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 PSMC3P17980 439 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 GDI1P31150 447 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 AFMP43652 599 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 RBP5P82980 135 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 FAM26FQ5R3K3 315 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 GAREM2Q75VX8 874 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 ITIH5Q86UX2 942 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 C1orf210Q8IVY1 113 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 NELFCDQ8IXH7 590 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 GRAMD1CQ8IYS0 662 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 DCP1BQ8IZD4 617 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 RDH13Q8NBN7 331 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 OR5B17Q8NGF7 314 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 RSPRY1Q96DX4 576 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 GPR88Q9GZN0 384 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 ATXN3LQ9H3M9 355 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 TRPV4Q9HBA0 871 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 TMLHEQ9NVH6 421 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 SIX4Q9UIU6 781 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 RCOR1Q9UKL0 485 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 ITGA11Q9UKX5 1188 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 L1RE1Q9UN81 338 aa12.85□□□□□ -0.35
CCHCR1-215ENST00000488920 HEPACAM2A8MVW5 462 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 CLIC2O15247 247 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms