RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ADCY1Q08828 1119 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 GPR17Q13304 367 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 RNF19BQ6ZMZ0 732 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 DCP1BQ8IZD4 617 aaKnown RBP16.17■□□□□ 0.18
CXCL12-207ENST00000488591 PDCL2Q8N4E4 241 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 NELFBQ8WX92 580 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 RPGRIP1Q96KN7 1286 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 MMS19Q96T76 1030 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 POMKQ9H5K3 350 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 L1RE1Q9UN81 338 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 POLIQ9UNA4 740 aa16.17■□□□□ 0.18
CXCL12-207ENST00000488591 TRIM49BA6NDI0 452 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 PPP1R3GB7ZBB8 358 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 TNFRSF10AO00220 468 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 SLC16A3O15427 465 aaKnown RBP16.16■□□□□ 0.18
CXCL12-207ENST00000488591 PAPLNO95428 1278 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 LRG1P02750 347 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 C4BPAP04003 597 aaKnown RBP16.16■□□□□ 0.18
CXCL12-207ENST00000488591 OR4Q2P0C623 313 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
CXCL12-207ENST00000488591 BMP6P22004 513 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 LHX1P48742 406 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 MYL6P60660 151 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 TNNC1P63316 161 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 TSPY1Q01534 308 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 SMARCB1Q12824 385 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 NCOA4Q13772 614 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 SGSM1Q2NKQ1 1148 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 WDR72Q3MJ13 1102 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 ZACNQ401N2 412 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 TDRD10Q5VZ19 366 aaKnown RBP16.16■□□□□ 0.18
CXCL12-207ENST00000488591 SCARA3Q6AZY7 606 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 SV2AQ7L0J3 742 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 ADGRF2Q8IZF7 708 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 ZNF707Q96C28 371 aaPredicted RBP16.16■□□□□ 0.18
CXCL12-207ENST00000488591 EEF2KMTQ96G04 330 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 CEP63Q96MT8 703 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 CDH22Q9UJ99 828 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 CTNND2Q9UQB3 1225 aa16.16■□□□□ 0.18
CXCL12-207ENST00000488591 A0A0C4DFX4 3053 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 C19orf67A6NJJ6 358 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 CCL16O15467 120 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 STAU1O95793 577 aaKnown RBP16.15■□□□□ 0.18
CXCL12-207ENST00000488591 POU2F2P09086 479 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 FAM163BP0C2L3 166 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 TRIM49P0CI25 452 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 TRIM49CP0CI26 452 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 PCSK1P29120 753 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 GTF2H1P32780 548 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 PMS1P54277 932 aaKnown RBP16.15■□□□□ 0.18
CXCL12-207ENST00000488591 PAK1Q13153 545 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 SOWAHAQ2M3V2 549 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 ZNF699Q32M78 642 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 SLC39A12Q504Y0 691 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 FOXR2Q6PJQ5 311 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 ZC3H3Q8IXZ2 948 aaKnown RBP16.15■□□□□ 0.18
CXCL12-207ENST00000488591 ELMOD1Q8N336 334 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 OR10T2Q8NGX3 314 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 C2orf15Q8WU43 125 aaKnown RBP16.15■□□□□ 0.18
CXCL12-207ENST00000488591 TAF4BQ92750 862 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 ACSF2Q96CM8 615 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-207ENST00000488591 PGLYRP2Q96PD5 576 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 ACBD6Q9BR61 282 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 ZCWPW1Q9H0M4 648 aa16.15■□□□□ 0.18
CXCL12-207ENST00000488591 METTL14Q9HCE5 456 aaKnown RBP16.15■□□□□ 0.18
CXCL12-207ENST00000488591 WDR6Q9NNW5 1121 aaKnown RBP16.15■□□□□ 0.18
CXCL12-207ENST00000488591 DDX43Q9NXZ2 648 aaKnown RBP16.15■□□□□ 0.18
CXCL12-207ENST00000488591 LOC730098B7Z3J9 87 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 SEC24AO95486 1093 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 FGFR1OPO95684 399 aaKnown RBP16.14■□□□□ 0.17
CXCL12-207ENST00000488591 P4HA1P13674 534 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 PIK3CAP42336 1068 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 GCLMP48507 274 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 PLD1Q13393 1074 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 ZNF667Q5HYK9 610 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 C1orf220Q5T0J3 134 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 POTEHQ6S545 545 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 OTOP3Q7RTS5 596 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 FILIP1Q7Z7B0 1213 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 MLKLQ8NB16 471 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 CCDC150Q8NCX0 1101 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 TMEM209Q96SK2 561 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 RTP3Q9BQQ7 232 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 IMPG2Q9BZV3 1241 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 SNX25Q9H3E2 840 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 MMRN2Q9H8L6 949 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 VRTNQ9H8Y1 702 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 TMEM8AQ9HCN3 771 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 HSFX1Q9UBD0 423 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 NXF1Q9UBU9 619 aaKnown RBP16.14■□□□□ 0.17
CXCL12-207ENST00000488591 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.17
CXCL12-207ENST00000488591 USTQ9Y2C2 406 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 INSL5Q9Y5Q6 135 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 TSC2P49815 1807 aa16.14■□□□□ 0.17
CXCL12-207ENST00000488591 MTMR11A4FU01 709 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 GABRDO14764 452 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 MBD3O95983 291 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 PTPN2P17706 415 aa16.13■□□□□ 0.17
CXCL12-207ENST00000488591 WARSP23381 471 aaKnown RBP16.13■□□□□ 0.17
CXCL12-207ENST00000488591 GNL1P36915 607 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms