RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ELOVL4Q9GZR5 314 aa21.52■■□□□ 1.03
NECAB3-213ENST00000488489 AGO3Q9H9G7 860 aaKnown RBP21.52■■□□□ 1.03
NECAB3-213ENST00000488489 UVRAGQ9P2Y5 699 aa21.52■■□□□ 1.03
NECAB3-213ENST00000488489 DDX3YO15523 660 aaKnown RBP21.51■■□□□ 1.03
NECAB3-213ENST00000488489 FKTNO75072 461 aa21.51■■□□□ 1.03
NECAB3-213ENST00000488489 CFAP221Q4G0U5 840 aa21.51■■□□□ 1.03
NECAB3-213ENST00000488489 PHF13Q86YI8 300 aaPredicted RBP21.51■■□□□ 1.03
NECAB3-213ENST00000488489 WDTC1Q8N5D0 677 aa21.51■■□□□ 1.03
NECAB3-213ENST00000488489 SLC4A11Q8NBS3 891 aa21.51■■□□□ 1.03
NECAB3-213ENST00000488489 TRIM7Q9C029 511 aa21.51■■□□□ 1.03
NECAB3-213ENST00000488489 CYP3A43Q9HB55 503 aa21.51■■□□□ 1.03
NECAB3-213ENST00000488489 TMEM110-MUSTN1A8MSY1 372 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 VSNL1P62760 191 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 ITIH3Q06033 890 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 MMS22LQ6ZRQ5 1243 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 BEST2Q8NFU1 509 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 CALR3Q96L12 384 aaKnown RBP21.5■■□□□ 1.03
NECAB3-213ENST00000488489 AVENQ9NQS1 362 aaPredicted RBP21.5■■□□□ 1.03
NECAB3-213ENST00000488489 RNF216Q9NWF9 866 aaPredicted RBP21.5■■□□□ 1.03
NECAB3-213ENST00000488489 ADAM22Q9P0K1 906 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 RNF14Q9UBS8 474 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 ADAM21Q9UKJ8 722 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 MEIS3P2A8K0S8 358 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 CES2O00748 559 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 P4HA1P13674 534 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 KCNE1P15382 129 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 PAFAH1B1P43034 410 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 C9orf57Q5W0N0 161 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 PCDHGC3Q9UN70 934 aa21.5■■□□□ 1.03
NECAB3-213ENST00000488489 MYBL1P10243 752 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 CD19P15391 556 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 COMTP21964 271 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 TNNC1P63316 161 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 SOX4Q06945 474 aaPredicted RBP21.49■■□□□ 1.03
NECAB3-213ENST00000488489 MYO1EQ12965 1108 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 DCAF12L1Q5VU92 463 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 SMYD5Q6GMV2 418 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 C1orf131Q8NDD1 294 aaKnown RBP21.49■■□□□ 1.03
NECAB3-213ENST00000488489 PBKQ96KB5 322 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 RBM12Q9NTZ6 932 aaKnown RBP21.49■■□□□ 1.03
NECAB3-213ENST00000488489 UBQLN1Q9UMX0 589 aaKnown RBP21.49■■□□□ 1.03
NECAB3-213ENST00000488489 PAEPP09466 180 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 MMP8P22894 467 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 INCA1Q0VD86 236 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 WDR93Q6P2C0 686 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 ALG3Q92685 438 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 TRIM11Q96F44 468 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 TMEM176AQ96HP8 235 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 VCPIP1Q96JH7 1222 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 ZFP42Q96MM3 310 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 GOLGA2P5Q9HBQ8 144 aa21.49■■□□□ 1.03
NECAB3-213ENST00000488489 CEP104O60308 925 aa21.48■■□□□ 1.03
NECAB3-213ENST00000488489 CABYRO75952 493 aa21.48■■□□□ 1.03
NECAB3-213ENST00000488489 SLAIN1Q8ND83 568 aa21.48■■□□□ 1.03
NECAB3-213ENST00000488489 HMX1Q9NP08 348 aaPredicted RBP21.48■■□□□ 1.03
NECAB3-213ENST00000488489 BARX2Q9UMQ3 279 aaPredicted RBP21.48■■□□□ 1.03
NECAB3-213ENST00000488489 SNX9Q9Y5X1 595 aa21.48■■□□□ 1.03
NECAB3-213ENST00000488489 TULP2O00295 520 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 PIRO00625 290 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 LSM8O95777 96 aaKnown RBP21.47■■□□□ 1.03
NECAB3-213ENST00000488489 GRK4P32298 578 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 CDH5P33151 784 aaPredicted RBP21.47■■□□□ 1.03
NECAB3-213ENST00000488489 NDST1P52848 882 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 GYS2P54840 703 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 PTPN11Q06124 597 aaPredicted RBP21.47■■□□□ 1.03
NECAB3-213ENST00000488489 C1QBPQ07021 282 aaKnown RBP21.47■■□□□ 1.03
NECAB3-213ENST00000488489 TRIM71Q2Q1W2 868 aaKnown RBP21.47■■□□□ 1.03
NECAB3-213ENST00000488489 DENND1BQ6P3S1 775 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 MMGT1Q8N4V1 131 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 LRRC52Q8N7C0 313 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 KRT35Q92764 455 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 RPS6KC1Q96S38 1066 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 FAM105AQ9NUU6 356 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 ANAPC7Q9UJX3 599 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 PTGESO14684 152 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 GHRP10912 638 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 CD52P31358 61 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 MARCKSL1P49006 195 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 PTK7Q13308 1070 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 MAMLD1Q13495 774 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 CASP8Q14790 479 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 FBXO47Q5MNV8 452 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 USP38Q8NB14 1042 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 TMEM35BQ8NCS4 154 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 CD101Q93033 1021 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 CHST12Q9NRB3 414 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 CYTH4Q9UIA0 394 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 PADI3Q9ULW8 664 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 PTCH2Q9Y6C5 1203 aa21.47■■□□□ 1.03
NECAB3-213ENST00000488489 TLR3O15455 904 aaKnown RBP21.46■■□□□ 1.03
NECAB3-213ENST00000488489 RPLP2P05387 115 aaKnown RBP21.46■■□□□ 1.03
NECAB3-213ENST00000488489 PLEKHA7Q6IQ23 1121 aa21.46■■□□□ 1.03
NECAB3-213ENST00000488489 RASGEF1CQ8N431 466 aa21.46■■□□□ 1.03
NECAB3-213ENST00000488489 GSTCDQ8NEC7 633 aa21.46■■□□□ 1.03
NECAB3-213ENST00000488489 ACTRT1Q8TDG2 376 aa21.46■■□□□ 1.03
NECAB3-213ENST00000488489 GLT1D1Q96MS3 346 aa21.46■■□□□ 1.03
NECAB3-213ENST00000488489 MRPL45Q9BRJ2 306 aaKnown RBP21.46■■□□□ 1.03
NECAB3-213ENST00000488489 ERVK-5Q9HDB9 667 aa21.46■■□□□ 1.03
NECAB3-213ENST00000488489 NOD1Q9Y239 953 aa21.46■■□□□ 1.03
NECAB3-213ENST00000488489 NME7Q9Y5B8 376 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms