RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TAAR9Q96RI9 348 aa5.45□□□□□ -1.54
ITGB1-214ENST00000488427 NEU1Q99519 415 aa5.45□□□□□ -1.54
ITGB1-214ENST00000488427 ZSWIM1Q9BR11 485 aa5.45□□□□□ -1.54
ITGB1-214ENST00000488427 MRPL46Q9H2W6 279 aaKnown RBP5.45□□□□□ -1.54
ITGB1-214ENST00000488427 SERHL2Q9H4I8 314 aa5.45□□□□□ -1.54
ITGB1-214ENST00000488427 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-214ENST00000488427 PIH1D1Q9NWS0 290 aaKnown RBP5.45□□□□□ -1.54
ITGB1-214ENST00000488427 PTPRTO14522 1441 aa5.45□□□□□ -1.54
ITGB1-214ENST00000488427 YEATS2Q9ULM3 1422 aa5.45□□□□□ -1.54
ITGB1-214ENST00000488427 PLB1Q6P1J6 1458 aa5.45□□□□□ -1.54
ITGB1-214ENST00000488427 PRAMEF33A0A0G2JMD5 474 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 CENPVL1A0A0U1RR11 272 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 PIPSLA2A3N6 862 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 LRRC14BA6NHZ5 514 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 POLRMTO00411 1230 aaKnown RBP5.44□□□□□ -1.54
ITGB1-214ENST00000488427 WNT10BO00744 389 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 TOR1BO14657 336 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 PRAMEF10O60809 474 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 RAMP2O60895 175 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 UBXN7O94888 489 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 THP07101 528 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 SBK3P0C264 359 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 NR4A1P22736 598 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 HTR1BP28222 390 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 ANXA11P50995 505 aaKnown RBP5.44□□□□□ -1.54
ITGB1-214ENST00000488427 VAV2P52735 878 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 ZNF135P52742 658 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-214ENST00000488427 CACNB3P54284 484 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 PSMC1P62191 440 aaKnown RBP5.44□□□□□ -1.54
ITGB1-214ENST00000488427 FPGSQ05932 587 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 DPTQ07507 201 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 ZNF267Q14586 743 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-214ENST00000488427 ANO6Q4KMQ2 910 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 SLC44A4Q53GD3 710 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 KHDC1LQ5JSQ8 128 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 EPM2AIP1Q7L775 607 aaPredicted RBP5.44□□□□□ -1.54
ITGB1-214ENST00000488427 SRGAP1Q7Z6B7 1085 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 SH2D3CQ8N5H7 860 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 CAVIN3Q969G5 261 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 FUBP1Q96AE4 644 aaKnown RBP5.44□□□□□ -1.54
ITGB1-214ENST00000488427 KLHL32Q96NJ5 620 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 PCED1AQ9H1Q7 454 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 RSAD1Q9HA92 442 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 INTS13Q9NVM9 706 aa5.44□□□□□ -1.54
ITGB1-214ENST00000488427 NOB1Q9ULX3 412 aaKnown RBP5.44□□□□□ -1.54
ITGB1-214ENST00000488427 A0A088AWK7 358 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 A0A1W2PPL8 197 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 MYO1CO00159 1063 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 TRIAP1O43715 76 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 XRCC6P12956 609 aaKnown RBP eCLIP5.43□□□□□ -1.54
ITGB1-214ENST00000488427 TGM1P22735 817 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 SLC6A4P31645 630 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 NKX6-1P78426 367 aaPredicted RBP5.43□□□□□ -1.54
ITGB1-214ENST00000488427 SLFN5Q08AF3 891 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 PLS1Q14651 629 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 HLXQ14774 488 aaPredicted RBP5.43□□□□□ -1.54
ITGB1-214ENST00000488427 B3GNTL1Q67FW5 361 aaPredicted RBP5.43□□□□□ -1.54
ITGB1-214ENST00000488427 LAIR1Q6GTX8 287 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 TAPT1Q6NXT6 567 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 CFAP52Q8N1V2 620 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 PDPRQ8NCN5 879 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 SNX19Q92543 992 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 SUCLG2Q96I99 432 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 TRIB1Q96RU8 372 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 WDR11Q9BZH6 1224 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 TMEM60Q9H2L4 133 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 CASS4Q9NQ75 786 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 USP25Q9UHP3 1055 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 MAP3K2Q9Y2U5 619 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 SPATA31A3Q5VYP0 1347 aa5.43□□□□□ -1.54
ITGB1-214ENST00000488427 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 ADAMTS12P58397 1594 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 ABCA5Q8WWZ7 1642 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 CAPN8A6NHC0 703 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 PHGDHO43175 533 aaKnown RBP5.42□□□□□ -1.54
ITGB1-214ENST00000488427 SPDEFO95238 335 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 ALDH2P05091 517 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 ITGAMP11215 1152 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 ATF3P18847 181 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 ITGALP20701 1170 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 HSPA1LP34931 641 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 RAB1AP62820 205 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 CYP2A13Q16696 494 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 FAM160B1Q5W0V3 765 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 LAYNQ6UX15 382 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 B3GNT9Q6UX72 402 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-214ENST00000488427 MICALCLQ6ZW33 695 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 TMIEQ8NEW7 156 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 RUNDC1Q96C34 613 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 PTCD3Q96EY7 689 aaKnown RBP5.42□□□□□ -1.54
ITGB1-214ENST00000488427 ACO2Q99798 780 aaKnown RBP5.42□□□□□ -1.54
ITGB1-214ENST00000488427 TEX101Q9BY14 249 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 TINAGL1Q9GZM7 467 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-214ENST00000488427 TOR3AQ9H497 397 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 KLHL42Q9P2K6 505 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 ANKFY1Q9P2R3 1169 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 DKK2Q9UBU2 259 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 PLEKHM1Q9Y4G2 1056 aa5.42□□□□□ -1.54
ITGB1-214ENST00000488427 PCDHA1Q9Y5I3 950 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms