RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ANPEPP15144 967 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 POLR2FP61218 127 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 CTDSPL2Q05D32 466 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 OXA1LQ15070 435 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 LLGL2Q6P1M3 1020 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 RNF111Q6ZNA4 994 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 METTL3Q86U44 580 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 CSGALNACT2Q8N6G5 542 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ANKRD53Q8N9V6 530 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 PLEKHA8Q96JA3 519 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ZKSCAN3Q9BRR0 538 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 WNT8AQ9H1J5 351 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 WASH6PQ9NQA3 447 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ASIC3Q9UHC3 531 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 GNPTGQ9UJJ9 305 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 RWDD3Q9Y3V2 267 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 SCINQ9Y6U3 715 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 RGPD1P0DJD0 1748 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ACOX3O15254 700 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 GSC2O15499 205 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 PRKACAP17612 351 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 EVI2BP34910 448 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ALDH3B2P48448 385 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 NR2C2P49116 596 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 TAGLNQ01995 201 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 RRAGBQ5VZM2 374 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 BTNL9Q6UXG8 535 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 NLRX1Q86UT6 975 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 USP38Q8NB14 1042 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 SPATA5Q8NB90 893 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 ZNF341Q9BYN7 854 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 CNOT7Q9UIV1 285 aaKnown RBP6.68□□□□□ -1.34
SIK3-212ENST00000488337 STARD13Q9Y3M8 1113 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 MAD1L1Q9Y6D9 718 aa6.68□□□□□ -1.34
SIK3-212ENST00000488337 HEG1Q9ULI3 1381 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SOS2Q07890 1332 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 MINDY4BA8MYZ0 360 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 KLRF2D3W0D1 207 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SLC9A3R1O14745 358 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 SHOXO15266 292 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 KRT6AP02538 564 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 KRT6BP04259 564 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 IL2RBP14784 551 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 CXCR5P32302 372 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 IFNAR2P48551 515 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 NR5A1Q13285 461 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 TNIP1Q15025 636 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 ANKRD20A4Q4UJ75 823 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 HSP90AA5PQ58FG0 334 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 PPP4R4Q6NUP7 873 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 DCP2Q8IU60 420 aaKnown RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 ARL6IP6Q8N6S5 226 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 ARRDC4Q8NCT1 418 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 OR6Y1Q8NGX8 325 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 STAMQ92783 540 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SYMPKQ92797 1274 aaKnown RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 SLC29A1Q99808 456 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 MTMR12Q9C0I1 747 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 NEK6Q9HC98 313 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 ZDHHC18Q9NUE0 388 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 GGA3Q9NZ52 723 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 GPRC5DQ9NZD1 345 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 IGSF9Q9P2J2 1179 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 KLHL42Q9P2K6 505 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 WDR19Q8NEZ3 1342 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 ZNF532Q9HCE3 1301 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 HDAC3O15379 428 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 HOXC11O43248 304 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 ACSL4O60488 711 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 PLEKHA8P1O95397 391 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 BMP15O95972 392 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 IFNAR1P17181 557 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 NUDT1P36639 197 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 UBXN2AP68543 259 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SF3A3Q12874 501 aaKnown RBP eCLIP6.67□□□□□ -1.343e-7■■■■□ 23.5
SIK3-212ENST00000488337 DPYDQ12882 1025 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SCARF1Q14162 830 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 C16orf72Q14CZ0 275 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 EDRF1Q3B7T1 1238 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 LSM12Q3MHD2 195 aaKnown RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 SH3RF1Q7Z6J0 888 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 RALGPS2Q86X27 583 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 RELL1Q8IUW5 271 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 CMTR1Q8N1G2 835 aaKnown RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 PDZD8Q8NEN9 1154 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 TRIB2Q92519 343 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 TOE1Q96GM8 510 aaKnown RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 VPS35Q96QK1 796 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 KRT12Q99456 494 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 RNF38Q9H0F5 515 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 NHEJ1Q9H9Q4 299 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.67□□□□□ -1.34
SIK3-212ENST00000488337 RRN3Q9NYV6 651 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 STK36Q9NRP7 1315 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 C15orf38-AP3S2A0A0A6YYH1 394 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 A6NL46 340 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SNTNA6NMZ2 147 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 POLR1CO15160 346 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 STAMBPO95630 424 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms