RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DLX2Q07687 328 aaPredicted RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 MRPL58Q14197 206 aaKnown RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 COL19A1Q14993 1142 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 NCAPHQ15003 741 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 SOWAHAQ2M3V2 549 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 SPATA31D4Q6ZUB0 917 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 DHX40Q8IX18 779 aaKnown RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 GPR65Q8IYL9 337 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 SLC22A17Q8WUG5 538 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 MMS19Q96T76 1030 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 CDCA3Q99618 268 aaPredicted RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 MRPL45Q9BRJ2 306 aaKnown RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 IMPG2Q9BZV3 1241 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 NAT10Q9H0A0 1025 aaKnown RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 SDCBP2Q9H190 292 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 HSD3B7Q9H2F3 369 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 MAN1C1Q9NR34 630 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 FANCLQ9NW38 375 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 TAB2Q9NYJ8 693 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 FNIP2Q9P278 1114 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 MAGEC2Q9UBF1 373 aaPredicted RBP11.85□□□□□ -0.51
UBE4B-210ENST00000488228 DSEQ9UL01 958 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 NME7Q9Y5B8 376 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 BACE2Q9Y5Z0 518 aa11.85□□□□□ -0.51
UBE4B-210ENST00000488228 GREB1Q4ZG55 1949 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 WDR27A2RRH5 827 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 TGM5O43548 720 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 TBC1D4O60343 1298 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 N4BP1O75113 896 aaKnown RBP11.84□□□□□ -0.51
UBE4B-210ENST00000488228 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
UBE4B-210ENST00000488228 ZNF165P49910 485 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 LRMPQ12912 555 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 KCNC3Q14003 757 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 CLUL1Q15846 466 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 MAN2A1Q16706 1144 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 SGSM1Q2NKQ1 1148 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 TCP11X2Q5H9J9 407 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 SLC8B1Q6J4K2 584 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 LIMS2Q7Z4I7 341 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 METTL23Q86XA0 190 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 TMEM86AQ8N2M4 240 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 FEZF2Q8TBJ5 459 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 PABPC5Q96DU9 382 aaKnown RBP11.84□□□□□ -0.51
UBE4B-210ENST00000488228 ARID3AQ99856 593 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 BPIFA3Q9BQP9 254 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 NIF3L1Q9GZT8 377 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 UBE2ZQ9H832 354 aaPredicted RBP11.84□□□□□ -0.51
UBE4B-210ENST00000488228 VRTNQ9H8Y1 702 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 RAB20Q9NX57 234 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 DDX43Q9NXZ2 648 aaKnown RBP11.84□□□□□ -0.51
UBE4B-210ENST00000488228 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 HMGXB4Q9UGU5 601 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 FBXW11Q9UKB1 542 aa11.84□□□□□ -0.51
UBE4B-210ENST00000488228 TCF20Q9UGU0 1960 aaKnown RBP11.84□□□□□ -0.51
UBE4B-210ENST00000488228 ZNF638Q14966 1978 aaKnown RBP11.83□□□□□ -0.52
UBE4B-210ENST00000488228 NOTCH4Q99466 2003 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 C5orf42Q9H799 3197 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 OR6C75A6NL08 312 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 H3BQ06 376 aaPredicted RBP11.83□□□□□ -0.52
UBE4B-210ENST00000488228 VNN2O95498 520 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 KCNA5P22460 613 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 WARSP23381 471 aaKnown RBP11.83□□□□□ -0.52
UBE4B-210ENST00000488228 EEF1GP26641 437 aaKnown RBP11.83□□□□□ -0.52
UBE4B-210ENST00000488228 LTBRP36941 435 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 CDH8P55286 799 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 PSMC1P62191 440 aaKnown RBP11.83□□□□□ -0.52
UBE4B-210ENST00000488228 TFF2Q03403 129 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 ORC1Q13415 861 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 ADAM15Q13444 863 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 RAB33AQ14088 237 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 KRT31Q15323 416 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 MIIPQ5JXC2 388 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 PPFIBP1Q86W92 1011 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 TAF4BQ92750 862 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 PGLYRP2Q96PD5 576 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 TUBGCP2Q9BSJ2 902 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 CRACR2AQ9BSW2 395 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 APOL5Q9BWW9 433 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 INTS2Q9H0H0 1204 aaKnown RBP11.83□□□□□ -0.52
UBE4B-210ENST00000488228 CBX8Q9HC52 389 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 CLEC1BQ9P126 229 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 CDH22Q9UJ99 828 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 COQ4Q9Y3A0 265 aa11.83□□□□□ -0.52
UBE4B-210ENST00000488228 DENND4CQ5VZ89 1909 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 FSD2A1L4K1 749 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 PES1O00541 588 aaKnown RBP11.82□□□□□ -0.52
UBE4B-210ENST00000488228 GABRDO14764 452 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 WEE2P0C1S8 567 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 SRGAP2BP0DMP2 458 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 P4HA1P13674 534 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 ZNF18P17022 549 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 CD58P19256 250 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 LMO2P25791 158 aa11.82□□□□□ -0.52
UBE4B-210ENST00000488228 APBA1Q02410 837 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms