RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 IQGAP3Q86VI3 1631 aa8.63□□□□□ -1.03
MCF2L2-212ENST00000488149 PRR36Q9H6K5 1346 aa8.63□□□□□ -1.03
MCF2L2-212ENST00000488149 KANSL1LA0AUZ9 987 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 MXD4Q14582 209 aaPredicted RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 BNC2Q6ZN30 1099 aaPredicted RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 LRRC74BQ6ZQY2 392 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SULF1Q8IWU6 871 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 PTPRN2Q92932 1015 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SH3GL1Q99961 368 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 CASS4Q9NQ75 786 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SLC24A2Q9UI40 661 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 FEM1BQ9UK73 627 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 NLRP1Q9C000 1473 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 PSTPIP1O43586 416 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 TRAPPC3O43617 180 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 FAM58BPP0C7Q3 252 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 FXR2P51116 673 aaKnown RBP eCLIP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SNRPFP62306 86 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 IYDQ6PHW0 289 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 LPCAT2Q7L5N7 544 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 ATG9AQ7Z3C6 839 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 TMPRSS6Q8IU80 811 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 ASAP3Q8TDY4 903 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 FAM210AQ96ND0 272 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 TRIM62Q9BVG3 475 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 ZNF408Q9H9D4 720 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 CST8O60676 142 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 GLRA3O75311 464 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 HSD17B4P51659 736 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 UBE3AQ05086 875 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SYCP2LQ5T4T6 812 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 MROH9Q5TGP6 573 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 PARVBQ9HBI1 364 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 EXOSC4Q9NPD3 245 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 ZNF446Q9NWS9 450 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 APPL1Q9UKG1 709 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 CCDC78A2IDD5 438 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 PDGFRAP16234 1089 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 DDX5P17844 614 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 PPIDQ08752 370 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 STILQ15468 1287 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SNRNP35Q16560 246 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 CATSPER4Q7RTX7 472 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 EFL1Q7Z2Z2 1120 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 LUZP2Q86TE4 346 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 CCDC60Q8IWA6 550 aaPredicted RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 GABBR1Q9UBS5 961 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 MINPP1Q9UNW1 487 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SAC3D1A6NKF1 404 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 CES2O00748 559 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 ZBTB39O15060 712 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 WBP4O75554 376 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 TNFAIP8O95379 198 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 STIP1P31948 543 aaKnown RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SSTR3P32745 418 aaPredicted RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 KCNK10P57789 538 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 CEP78Q5JTW2 689 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 VPS50Q96JG6 964 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 THAP2Q9H0W7 228 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 FAM217BQ9NTX9 383 aaPredicted RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 ARHGEF38Q9NXL2 777 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 DCDC2Q9UHG0 476 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SUGT1Q9Y2Z0 365 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 QRICH2Q9H0J4 1663 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 UBAP1LF5GYI3 381 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 MYBP10242 640 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 NME3Q13232 169 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 EAPPQ56P03 285 aaPredicted RBP8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 DPP9Q86TI2 863 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 BTBD10Q9BSF8 475 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 BBS2Q9BXC9 721 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 TMEM120AQ9BXJ8 343 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 SP110Q9HB58 689 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 HPS5Q9UPZ3 1129 aa8.62□□□□□ -1.03
MCF2L2-212ENST00000488149 ELF3P78545 371 aaPredicted RBP8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 NFX1Q12986 1120 aaKnown RBP8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 HLFQ16534 295 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 C1orf131Q8NDD1 294 aaKnown RBP8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 FEZF2Q8TBJ5 459 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 FAM162AQ96A26 154 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 WNK4Q96J92 1243 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 PPP1R2P1Q96PQ5 205 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 TMEM8AQ9HCN3 771 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 DNAJC5BQ9UF47 199 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 ZMYND8Q9ULU4 1186 aaPredicted RBP8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 MYO1GB0I1T2 1018 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 TLR2O60603 784 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 PTENP60484 403 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 ZNF844Q08AG5 666 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 STXBP2Q15833 593 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 MAP3K14Q99558 947 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 FAM118BQ9BPY3 351 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 IL25Q9H293 177 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 MMADHCQ9H3L0 296 aaPredicted RBP8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 SOX13Q9UN79 622 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 KPNA4O00629 521 aaPredicted RBP8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 AHCYL1O43865 530 aa8.61□□□□□ -1.03
MCF2L2-212ENST00000488149 ALDH5A1P51649 535 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms