RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ADGRF2Q8IZF7 708 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 TC2NQ8N9U0 490 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 IGSF21Q96ID5 467 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 FAM84AQ96KN4 292 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 KREMEN1Q96MU8 473 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 CWH43Q9H720 699 aa11.79□□□□□ -0.52
HDLBP-242ENST00000488013 PRG3Q9Y2Y8 225 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-242ENST00000488013 TTC3P53804 2025 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 SSU72P8A0A1W2PR75 194 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 GABRDO14764 452 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 PPEF2O14830 753 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 SPTLC1O15269 473 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 LRRN2O75325 713 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 OAZ2O95190 189 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 IPO7O95373 1038 aaKnown RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 ACO1P21399 889 aaKnown RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 PDE6CP51160 858 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 ZNF132P52740 706 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 PLCB3Q01970 1234 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 CREMQ03060 361 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 YWHAHQ04917 246 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 UBE3AQ05086 875 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 SMARCB1Q12824 385 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 USP41Q3LFD5 358 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 FUT10Q6P4F1 479 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 GJB7Q6PEY0 223 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 ANKS3Q6ZW76 656 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 DDX53Q86TM3 631 aaKnown RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 SLC39A11Q8N1S5 342 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 TXLNBQ8N3L3 684 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 PDCL2Q8N4E4 241 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 UBR7Q8N806 425 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 OR6B3Q8NGW1 331 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 TRIM44Q96DX7 344 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 TMEM176AQ96HP8 235 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 BAG1Q99933 345 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 ACBD6Q9BR61 282 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 LUC7LQ9NQ29 371 aaKnown RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 DNAJB4Q9UDY4 337 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 MSRAQ9UJ68 235 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 POLIQ9UNA4 740 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 LZTS1Q9Y250 596 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 STXBP5LQ9Y2K9 1186 aa11.78□□□□□ -0.52
HDLBP-242ENST00000488013 MRPL42Q9Y6G3 142 aaKnown RBP11.78□□□□□ -0.52
HDLBP-242ENST00000488013 A0A1W2PPC1 479 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 OR6C75A6NL08 312 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 A8MXQ7 604 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 VDRP11473 427 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 CD58P19256 250 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 FGFR3P22607 806 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 FECHP22830 423 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 BMPR1AP36894 532 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 TSPY1Q01534 308 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 MLLT1Q03111 559 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-242ENST00000488013 PTPN21Q16825 1174 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 C9orf50Q5SZB4 431 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 FAM171A1Q5VUB5 890 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 WSCD1Q658N2 575 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 OVOS1Q6IE37 1185 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 ZNF280DQ6N043 979 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 KIAA1841Q6NSI8 718 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 SCARA5Q6ZMJ2 495 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 TRIM72Q6ZMU5 477 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 LRRC8AQ8IWT6 810 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 TDHQ8IZJ6 230 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 CRYBG2Q8N1P7 616 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 COLGALT1Q8NBJ5 622 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 RBBP8NLQ8NC74 664 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-242ENST00000488013 C3orf58Q8NDZ4 430 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 CCDC42Q96M95 316 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 ARID3AQ99856 593 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 PAAF1Q9BRP4 392 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 TTPALQ9BTX7 342 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 C11orf84Q9BUA3 381 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-242ENST00000488013 GPR88Q9GZN0 384 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 DEF6Q9H4E7 631 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 SMYD3Q9H7B4 428 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDLBP-242ENST00000488013 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDLBP-242ENST00000488013 MARCH5Q9NX47 278 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 CDH9Q9ULB4 789 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 L1RE1Q9UN81 338 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 CEP83Q9Y592 693 aa11.77□□□□□ -0.53
HDLBP-242ENST00000488013 C5orf67F2Z3F1 127 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 CYP26A1O43174 497 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 ARHGAP6O43182 974 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 SOD2P04179 222 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 CYP11B1P15538 503 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-242ENST00000488013 NDST1P52848 882 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 SLC8A3P57103 927 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 SNX16P57768 344 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 APBA1Q02410 837 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 NFE2Q16621 373 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-242ENST00000488013 TDRD12Q587J7 1177 aaKnown RBP11.76□□□□□ -0.53
HDLBP-242ENST00000488013 PDE12Q6L8Q7 609 aaKnown RBP11.76□□□□□ -0.53
HDLBP-242ENST00000488013 CD300LGQ6UXG3 332 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 IRF2BP2Q7Z5L9 587 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms