RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 RSPRY1Q96DX4 576 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PYM1Q9BRP8 204 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MKNK1Q9BUB5 465 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZCWPW1Q9H0M4 648 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CUEDC2Q9H467 287 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 EXOC7Q9UPT5 735 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MYH10P35580 1976 aa12.12□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GOLGA8IPA6NC78 632 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GOLGA8JA6NMD2 632 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ARNTLO00327 626 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CYB561D2O14569 222 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZNF197O14709 1029 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ITGB3P05106 788 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MYL4P12829 197 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 RFX1P22670 979 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PAX3P23760 479 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 POLR2BP30876 1174 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PLD1Q13393 1074 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 POSTNQ15063 836 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TEAD2Q15562 447 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SV2CQ496J9 727 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SLC39A12Q504Y0 691 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 WSCD1Q658N2 575 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 FRMD5Q7Z6J6 570 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ELMOD1Q8N336 334 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SMARCD2Q92925 531 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PSMG2Q969U7 264 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DHX58Q96C10 678 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MTMR12Q9C0I1 747 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TRPV4Q9HBA0 871 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 HSFX1Q9UBD0 423 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SIX4Q9UIU6 781 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DSEQ9UL01 958 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MTF2Q9Y483 593 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
RAB11FIP3-210ENST00000487899 A0A1W2PRU2 124 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 KANSL1LA0AUZ9 987 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 EIF3DO15371 548 aaKnown RBP eCLIP12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 EXTL3O43909 919 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CASP1P29466 404 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CDR1P51861 262 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ASIC1P78348 528 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TFAMQ00059 246 aaKnown RBP12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PFKPQ01813 784 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PRKCQQ04759 706 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CYP4A22Q5TCH4 519 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 IQCEQ6IPM2 695 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ARMCX5Q6P1M9 558 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TPRG1Q6ZUI0 275 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GAREM2Q75VX8 874 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 LRRTM3Q86VH5 581 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MAML2Q8IZL2 1156 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZSCAN18Q8TBC5 510 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 DNASE1L2Q92874 299 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZNF512Q96ME7 567 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PKMYT1Q99640 499 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 LPIN3Q9BQK8 851 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PCIF1Q9H4Z3 704 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PDE11AQ9HCR9 933 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 LTB4R2Q9NPC1 389 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 HEBP1Q9NRV9 189 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TMLHEQ9NVH6 421 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 L1RE1Q9UN81 338 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SIT1Q9Y3P8 196 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 UBE4BO95155 1302 aa12.1□□□□□ -0.47
RAB11FIP3-210ENST00000487899 STK25O00506 426 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 HCRTO43612 131 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PRAMEF12O95522 483 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CD72P21854 359 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TARSP26639 723 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PNPLA4P41247 253 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 VIPR2P41587 438 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 EPHB3P54753 998 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SLC44A4Q53GD3 710 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 FAM26FQ5R3K3 315 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 RESP18Q5W5W9 173 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 CBWD2Q8IUF1 395 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 GPD1LQ8N335 351 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 PDCL2Q8N4E4 241 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 LRRC52Q8N7C0 313 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 OR5B17Q8NGF7 314 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 KCNG4Q8TDN1 519 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SHDQ96IW2 340 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 SEPT5Q99719 369 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 TMEM206Q9H813 350 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 MAGEF1Q9HAY2 307 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 IL21Q9HBE4 155 aa12.09□□□□□ -0.47
RAB11FIP3-210ENST00000487899 ZFP14Q9HCL3 533 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms