RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 PTPN21Q16825 1174 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 COBLL1Q53SF7 1204 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 GET4Q7L5D6 327 aaPredicted RBP18.33■□□□□ 0.52
HMG20B-212ENST00000487894 PLCD3Q8N3E9 789 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 ACSF2Q96CM8 615 aaPredicted RBP18.33■□□□□ 0.52
HMG20B-212ENST00000487894 HPDLQ96IR7 371 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 MYADMQ96S97 322 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 ZCWPW1Q9H0M4 648 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 CRISPLD1Q9H336 500 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 C11orf16Q9NQ32 467 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 DNMT3BQ9UBC3 853 aaKnown RBP18.33■□□□□ 0.52
HMG20B-212ENST00000487894 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.52
HMG20B-212ENST00000487894 YIPF1Q9Y548 306 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 SNX9Q9Y5X1 595 aa18.33■□□□□ 0.52
HMG20B-212ENST00000487894 GREB1Q4ZG55 1949 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 HUS1O60921 280 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 CST3P01034 146 aaPredicted RBP18.32■□□□□ 0.52
HMG20B-212ENST00000487894 GBP2P32456 591 aaPredicted RBP18.32■□□□□ 0.52
HMG20B-212ENST00000487894 PRCPP42785 496 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 CLDN10P78369 228 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 MYO1EQ12965 1108 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 CEP135Q66GS9 1140 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 THEM5Q8N1Q8 247 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 TMEM86AQ8N2M4 240 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 TOP6BLQ8N6T0 577 aa18.32■□□□□ 0.52
HMG20B-212ENST00000487894 R3HCC1Q9Y3T6 440 aaKnown RBP18.32■□□□□ 0.52
HMG20B-212ENST00000487894 NUP210Q8TEM1 1887 aaPredicted RBP18.31■□□□□ 0.52
HMG20B-212ENST00000487894 MAPK13O15264 365 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 FSHRP23945 695 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 UBE2HP62256 183 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 DLG4P78352 724 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 TWF1Q12792 350 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 SOWAHAQ2M3V2 549 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 PABPC1LQ4VXU2 614 aaKnown RBP18.31■□□□□ 0.52
HMG20B-212ENST00000487894 SLC39A12Q504Y0 691 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 TDRD10Q5VZ19 366 aaKnown RBP18.31■□□□□ 0.52
HMG20B-212ENST00000487894 CENPPQ6IPU0 288 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 LIMS2Q7Z4I7 341 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 OSTM1Q86WC4 334 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 TTC9BQ8N6N2 239 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 C1QTNF1Q9BXJ1 281 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 EPS15L1Q9UBC2 864 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 FRMD4BQ9Y2L6 1034 aa18.31■□□□□ 0.52
HMG20B-212ENST00000487894 FAM86C2PA6NEL3 165 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 AKAP3O75969 853 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 ASGR2P07307 311 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 DUSP4Q13115 394 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 C1orf220Q5T0J3 134 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 LRRTM3Q86VH5 581 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 ADGRF2Q8IZF7 708 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 ATAD1Q8NBU5 361 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 ITFG1Q8TB96 612 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 SPATA18Q8TC71 538 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 TMC2Q8TDI7 906 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 KBTBD7Q8WVZ9 684 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 DDX43Q9NXZ2 648 aaKnown RBP18.3■□□□□ 0.52
HMG20B-212ENST00000487894 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.3■□□□□ 0.52
HMG20B-212ENST00000487894 CEP72Q9P209 647 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 LIMD1Q9UGP4 676 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 MAN1B1Q9UKM7 699 aa18.3■□□□□ 0.52
HMG20B-212ENST00000487894 KMT2EQ8IZD2 1858 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 GABRDO14764 452 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 HCRTO43612 131 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
HMG20B-212ENST00000487894 C4BPAP04003 597 aaKnown RBP18.29■□□□□ 0.52
HMG20B-212ENST00000487894 RHOP08100 348 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 RPL13P26373 211 aaKnown RBP18.29■□□□□ 0.52
HMG20B-212ENST00000487894 AP3M2P53677 418 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 MYL6P60660 151 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 ZXDAP98168 799 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 SLC5A9Q2M3M2 681 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 DPH6Q7L8W6 267 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 ADSSL1Q8N142 457 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 EDAQ92838 391 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 XYLT2Q9H1B5 865 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 AVENQ9NQS1 362 aaPredicted RBP18.29■□□□□ 0.52
HMG20B-212ENST00000487894 TMLHEQ9NVH6 421 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 HSFX1Q9UBD0 423 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 SORCS3Q9UPU3 1222 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 SLC27A5Q9Y2P5 690 aa18.29■□□□□ 0.52
HMG20B-212ENST00000487894 GPR37L1O60883 481 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 SOAT2O75908 522 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 VNN1O95497 513 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 LAMP2P13473 410 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 PTPN2P17706 415 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 ACAT1P24752 427 aaKnown RBP18.28■□□□□ 0.52
HMG20B-212ENST00000487894 CDR1P51861 262 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 MYL7Q01449 175 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 ADAM9Q13443 819 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 BIRC3Q13489 604 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 TRPC3Q13507 836 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 INTS6LQ5JSJ4 861 aaKnown RBP18.28■□□□□ 0.52
HMG20B-212ENST00000487894 PRSS36Q5K4E3 855 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 ISM2Q6H9L7 571 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 FAM186BQ8IYM0 893 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 DCP1BQ8IZD4 617 aaKnown RBP18.28■□□□□ 0.52
HMG20B-212ENST00000487894 PKMYT1Q99640 499 aa18.28■□□□□ 0.52
HMG20B-212ENST00000487894 ACBD6Q9BR61 282 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms