RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZNF785A8K8V0 405 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 F5H697 171 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 VPS4BO75351 444 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 GJB1P08034 283 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 NR2F6P10588 404 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 TOB1P50616 345 aaPredicted RBP5.63□□□□□ -1.51
SMC4-219ENST00000487747 GUCY2FP51841 1108 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 NXPH1P58417 271 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 ITIH3Q06033 890 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 TMEM119Q4V9L6 283 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 SLC4A10Q6U841 1118 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 PSD4Q8NDX1 1056 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 SCAMP4Q969E2 229 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 C1orf43Q9BWL3 253 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 C1QTNF7Q9BXJ2 289 aa5.63□□□□□ -1.51
SMC4-219ENST00000487747 PRKCGP05129 697 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 PDHA1P08559 390 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 PCSK6P29122 969 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 NDUFV1P49821 464 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 ZNF135P52742 658 aaPredicted RBP5.62□□□□□ -1.51
SMC4-219ENST00000487747 FAM50AQ14320 339 aaKnown RBP5.62□□□□□ -1.51
SMC4-219ENST00000487747 ZNF782Q6ZMW2 699 aaPredicted RBP5.62□□□□□ -1.51
SMC4-219ENST00000487747 PTF1AQ7RTS3 328 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 PDSS2Q86YH6 399 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 SMG7Q92540 1137 aaKnown RBP5.62□□□□□ -1.51
SMC4-219ENST00000487747 MTMR8Q96EF0 704 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 PBKQ96KB5 322 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 TPSD1Q9BZJ3 242 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 BRD9Q9H8M2 597 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 SPC25Q9HBM1 224 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 SLAMF7Q9NQ25 335 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 SERGEFQ9UGK8 458 aa5.62□□□□□ -1.51
SMC4-219ENST00000487747 SHTN1A0MZ66 631 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 URI1O94763 535 aaPredicted RBP5.61□□□□□ -1.51
SMC4-219ENST00000487747 ZRANB2O95218 330 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMC4-219ENST00000487747 KIF20AO95235 890 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 TNKSO95271 1327 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 ANXA1P04083 346 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 JUPP14923 745 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 SOX10P56693 466 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 EVA1CP58658 441 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 HABP2Q14520 560 aaPredicted RBP5.61□□□□□ -1.51
SMC4-219ENST00000487747 VPS53Q5VIR6 699 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 SPATA31A3Q5VYP0 1347 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 PPP4R3AQ6IN85 833 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 TTC7BQ86TV6 843 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 AOPEPQ8N6M6 819 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 ACTRT3Q9BYD9 372 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 SERHLQ9NQF3 203 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 ZNF70Q9UC06 446 aaPredicted RBP5.61□□□□□ -1.51
SMC4-219ENST00000487747 PADI4Q9UM07 663 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 PCDHA3Q9Y5H8 950 aa5.61□□□□□ -1.51
SMC4-219ENST00000487747 CFAP20Q9Y6A4 193 aaKnown RBP5.61□□□□□ -1.51
SMC4-219ENST00000487747 TTLL1O95922 423 aa5.6□□□□□ -1.51
SMC4-219ENST00000487747 CDK11BP21127 795 aaKnown RBP5.6□□□□□ -1.51
SMC4-219ENST00000487747 DRD4P21917 467 aa5.6□□□□□ -1.51
SMC4-219ENST00000487747 BOP1Q14137 746 aaKnown RBP5.6□□□□□ -1.51
SMC4-219ENST00000487747 RBM20Q5T481 1227 aaKnown RBP5.6□□□□□ -1.51
SMC4-219ENST00000487747 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
SMC4-219ENST00000487747 ZNF425Q6IV72 752 aa5.6□□□□□ -1.51
SMC4-219ENST00000487747 FKBP10Q96AY3 582 aa5.6□□□□□ -1.51
SMC4-219ENST00000487747 GPR35Q9HC97 309 aa5.6□□□□□ -1.51
SMC4-219ENST00000487747 SIDT1Q9NXL6 827 aaKnown RBP5.6□□□□□ -1.51
SMC4-219ENST00000487747 MRFAP1Q9Y605 127 aa5.6□□□□□ -1.51
SMC4-219ENST00000487747 HNRNPCP07910 306 aaKnown RBP eCLIP5.59□□□□□ -1.51
SMC4-219ENST00000487747 EBLN1P0CF75 366 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 NHLRC4P0CG21 123 aaPredicted RBP5.59□□□□□ -1.51
SMC4-219ENST00000487747 PRDX5P30044 214 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 CYP2C19P33261 490 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 CCT8P50990 548 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 ADKP55263 362 aaKnown RBP5.59□□□□□ -1.51
SMC4-219ENST00000487747 TBCCQ15814 346 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 PTPN21Q16825 1174 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 FAM153CQ494X1 144 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 EFCAB2Q5VUJ9 269 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 PNMA8AQ86V59 439 aaPredicted RBP5.59□□□□□ -1.51
SMC4-219ENST00000487747 FAM90A1Q86YD7 464 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 OSBPL9Q96SU4 736 aa5.59□□□□□ -1.51
SMC4-219ENST00000487747 LINC01548A6NM66 108 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 GCOM1H8Y6P7 765 aaPredicted RBP5.58□□□□□ -1.52
SMC4-219ENST00000487747 TRIAP1O43715 76 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 ZFXP17010 805 aaPredicted RBP5.58□□□□□ -1.52
SMC4-219ENST00000487747 SMARCA1P28370 1054 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 KRT85P78386 507 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 AMPD3Q01432 767 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 EIF2B5Q13144 721 aaKnown RBP5.58□□□□□ -1.52
SMC4-219ENST00000487747 SRSF7Q16629 238 aaKnown RBP eCLIP5.58□□□□□ -1.52
SMC4-219ENST00000487747 FAM109AQ8N4B1 249 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 VGLL2Q8N8G2 317 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 PRPF38AQ8NAV1 312 aaKnown RBP5.58□□□□□ -1.52
SMC4-219ENST00000487747 SEMA6DQ8NFY4 1073 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 MAN1C1Q9NR34 630 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 SERTAD4Q9NUC0 356 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 CFAP97Q9P2B7 532 aa5.58□□□□□ -1.52
SMC4-219ENST00000487747 KRTAP29-1A8MX34 341 aaPredicted RBP5.57□□□□□ -1.52
SMC4-219ENST00000487747 TARM1B6A8C7 271 aa5.57□□□□□ -1.52
SMC4-219ENST00000487747 PPM1DO15297 605 aa5.57□□□□□ -1.52
SMC4-219ENST00000487747 TP73O15350 636 aa5.57□□□□□ -1.52
SMC4-219ENST00000487747 GNAI3P08754 354 aa5.57□□□□□ -1.52
SMC4-219ENST00000487747 PIK3CGP48736 1102 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms