RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 HUS1O60921 280 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 RPN1P04843 607 aaKnown RBP22■■□□□ 1.11
HDAC4-209ENST00000487617 PRR29P0C7W0 189 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 DLATP10515 647 aaKnown RBP22■■□□□ 1.11
HDAC4-209ENST00000487617 CEBPBP17676 345 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 ALDH1A3P47895 512 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 SLC39A12Q504Y0 691 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 CYP4A22Q5TCH4 519 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 KRBA2Q6ZNG9 492 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 MTSS1LQ765P7 747 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 C12orf56Q8IXR9 622 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 HS6ST3Q8IZP7 471 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 PDCL2Q8N4E4 241 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 GOLGA5Q8TBA6 731 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 FGF14Q92915 247 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 CCDC47Q96A33 483 aaKnown RBP22■■□□□ 1.11
HDAC4-209ENST00000487617 MCRS1Q96EZ8 462 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 FNBP1Q96RU3 617 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 MFSD1Q9H3U5 465 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 SCN1AP35498 2009 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 DOCK6Q96HP0 2047 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 DOCK8Q8NF50 2099 aa22■■□□□ 1.11
HDAC4-209ENST00000487617 EXOC3O60645 756 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 CFHP08603 1231 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 SRFP11831 508 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 CDR1P51861 262 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 EPHB3P54753 998 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 CYP24A1Q07973 514 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 MYO1EQ12965 1108 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 PSMD6Q15008 389 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 PRSS36Q5K4E3 855 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 CCDC127Q96BQ5 260 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 TCEAL4Q96EI5 215 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 RPP25Q9BUL9 199 aaKnown RBP21.99■■□□□ 1.11
HDAC4-209ENST00000487617 ASAH2Q9NR71 780 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 GDE1Q9NZC3 331 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 L1RE1Q9UN81 338 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 SNX9Q9Y5X1 595 aa21.99■■□□□ 1.11
HDAC4-209ENST00000487617 ZNF202O95125 648 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 MYL4P12829 197 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 TNNI1P19237 187 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 CCR2P41597 374 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 VCPP55072 806 aaKnown RBP21.98■■□□□ 1.11
HDAC4-209ENST00000487617 DCP1BQ8IZD4 617 aaKnown RBP21.98■■□□□ 1.11
HDAC4-209ENST00000487617 TTC9BQ8N6N2 239 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 LEMD2Q8NC56 503 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 HPDLQ96IR7 371 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 CGRRF1Q99675 332 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 KCNH6Q9H252 994 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 GDAP2Q9NXN4 497 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 HSFX1Q9UBD0 423 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 TRIOO75962 3097 aa21.98■■□□□ 1.11
HDAC4-209ENST00000487617 GOLGA6L4A6NEF3 574 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 PRPF40AO75400 957 aaKnown RBP21.97■■□□□ 1.11
HDAC4-209ENST00000487617 SOAT2O75908 522 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 MICAL2O94851 1124 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 AVPR2P30518 371 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 TSPY1Q01534 308 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 DPYDQ12882 1025 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 TRAPPC11Q7Z392 1133 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 LRRTM3Q86VH5 581 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 SIX5Q8N196 739 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 TMEM86AQ8N2M4 240 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 FAM122AQ96E09 287 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 SEPT5Q99719 369 aaPredicted RBP21.97■■□□□ 1.11
HDAC4-209ENST00000487617 KXD1Q9BQD3 176 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 DNAJC25Q9H1X3 360 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 DDX43Q9NXZ2 648 aaKnown RBP21.97■■□□□ 1.11
HDAC4-209ENST00000487617 WNT16Q9UBV4 365 aa21.97■■□□□ 1.11
HDAC4-209ENST00000487617 TUFMP49411 452 aaKnown RBP21.96■■□□□ 1.11
HDAC4-209ENST00000487617 EPHA5P54756 1037 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 SMARCB1Q12824 385 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 MGAT5BQ3V5L5 792 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 IER5LQ5T953 404 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 TOP6BLQ8N6T0 577 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 FLCNQ8NFG4 579 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 C2orf15Q8WU43 125 aaKnown RBP21.96■■□□□ 1.11
HDAC4-209ENST00000487617 CCDC34Q96HJ3 373 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 KCTD10Q9H3F6 313 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 ABI2Q9NYB9 513 aaPredicted RBP21.96■■□□□ 1.11
HDAC4-209ENST00000487617 ASB3Q9Y575 518 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 TSC2P49815 1807 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 NOTCH4Q99466 2003 aa21.96■■□□□ 1.11
HDAC4-209ENST00000487617 RHOBTB3O94955 611 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 GJA1P17302 382 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 PLA2G5P39877 138 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 MYL7Q01449 175 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 POTEHQ6S545 545 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 ADGRF2Q8IZF7 708 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 FAM200AQ8TCP9 573 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 SPPL2BQ8TCT7 592 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 GPR152Q8TDT2 470 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 SLC2A4RGQ9NR83 387 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 DMAC2Q9NW81 257 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 CA14Q9ULX7 337 aa21.95■■□□□ 1.1
HDAC4-209ENST00000487617 TCHHQ07283 1943 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 PDXKO00764 312 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 NRG2O14511 850 aaPredicted RBP21.94■■□□□ 1.1
HDAC4-209ENST00000487617 MOSPD3O75425 235 aa21.94■■□□□ 1.1
HDAC4-209ENST00000487617 KIF20AO95235 890 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms