RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 GRAP2O75791 330 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 CCNE2O96020 404 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 SAT1P21673 171 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 MCL1Q07820 350 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 TMEM62Q0P6H9 643 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 SPATA18Q8TC71 538 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 SERPINB12Q96P63 405 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 PARK7Q99497 189 aaKnown RBP12.43□□□□□ -0.42
TRA2B-214ENST00000487615 MYPNQ86TC9 1320 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 SYF2O95926 243 aaKnown RBP12.43□□□□□ -0.42
TRA2B-214ENST00000487615 KRT10P13645 584 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 CCNG2Q16589 344 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRA2B-214ENST00000487615 UBA3Q8TBC4 463 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 MYCBPAPQ8TBZ2 947 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 ACSF2Q96CM8 615 aaPredicted RBP12.43□□□□□ -0.42
TRA2B-214ENST00000487615 GRAMD1AQ96CP6 724 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 CYTH2Q99418 400 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 FAM49BQ9NUQ9 324 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 GPRC5DQ9NZD1 345 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 ATP8B3O60423 1300 aa12.43□□□□□ -0.42
TRA2B-214ENST00000487615 CAND2O75155 1236 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 RARAP10276 462 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 ITKQ08881 620 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 DRP2Q13474 957 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 VGLL4Q14135 290 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 DGKDQ16760 1214 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 CCDC117Q8IWD4 279 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-214ENST00000487615 LMNTD2Q8IXW0 634 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 MDM1Q8TC05 714 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 TRIM55Q9BYV6 548 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 ASCC2Q9H1I8 757 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-214ENST00000487615 PPCSQ9HAB8 311 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 KLHL8Q9P2G9 620 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-214ENST00000487615 SPDYE16A6NNV3 312 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-214ENST00000487615 LCP1P13796 627 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 GPD1P21695 349 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 GLRA2P23416 452 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 TFDP3Q5H9I0 405 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 RIOX2Q8IUF8 465 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 SGSM3Q96HU1 749 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 SEC16BQ96JE7 1060 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 CDC42EP4Q9H3Q1 356 aaKnown RBP12.42□□□□□ -0.42
TRA2B-214ENST00000487615 SMG5Q9UPR3 1016 aaKnown RBP12.42□□□□□ -0.42
TRA2B-214ENST00000487615 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 SPATA31C2B4DYI2 1134 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 KCNN4O15554 427 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 CYP2C9P11712 490 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 CLNS1AP54105 237 aaKnown RBP12.42□□□□□ -0.42
TRA2B-214ENST00000487615 ATG16L1Q676U5 607 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 ASAP3Q8TDY4 903 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 EPS8L3Q8TE67 593 aaKnown RBP12.42□□□□□ -0.42
TRA2B-214ENST00000487615 CLEC4DQ8WXI8 215 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 SCYL1Q96KG9 808 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 SEMA4AQ9H3S1 761 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 RIPK3Q9Y572 518 aa12.42□□□□□ -0.42
TRA2B-214ENST00000487615 RRN3P2A6NIE6 340 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 SMAPO00193 183 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 CREB3O43889 395 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 STAG3L1P0CL83 205 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 CXCL8P10145 99 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 FMO1Q01740 532 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 RRP1BQ14684 758 aaKnown RBP12.41□□□□□ -0.42
TRA2B-214ENST00000487615 ZNF449Q6P9G9 518 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 RIBC1Q8N443 379 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-214ENST00000487615 MREGQ8N565 214 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 ST6GALNAC4Q9H4F1 302 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 RAB6BQ9NRW1 208 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 CFAP69A5D8W1 941 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 ACKR2O00590 384 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 RPL21P46778 160 aaKnown RBP12.41□□□□□ -0.42
TRA2B-214ENST00000487615 ZNF844Q08AG5 666 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 EFHC2Q5JST6 749 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 EFCC1Q9HA90 598 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 MAGED2Q9UNF1 606 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-214ENST00000487615 FAM47DPA6NHR8 397 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 CD4P01730 458 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 VDRP11473 427 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 JAG1P78504 1218 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 PPATQ06203 517 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 E2F5Q15329 346 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 ASTE1Q2TB18 679 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-214ENST00000487615 ZACNQ401N2 412 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 RAPH1Q70E73 1250 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 APPL2Q8NEU8 664 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 DMAC2Q9NW81 257 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 DPP3Q9NY33 737 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 PSMC3IPQ9P2W1 217 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-214ENST00000487615 C4BP0C0L5 1744 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 A0A087WZ62 844 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 A0A0G2JND7 137 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 APRTP07741 180 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 JAM2P57087 298 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 TMPRSS15P98073 1019 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 ORC1Q13415 861 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 RNF139Q8WU17 664 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms