RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 WNT7BP56706 349 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
VPS16-208ENST00000487461 POSTNQ15063 836 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 SLC39A12Q504Y0 691 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 WSCD1Q658N2 575 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 SV2BQ7L1I2 683 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 ARID3BQ8IVW6 561 aaPredicted RBP13.19□□□□□ -0.3
VPS16-208ENST00000487461 FAM3CQ92520 227 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 NELL1Q92832 810 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 E2F7Q96AV8 911 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 LRRC3BQ96PB8 259 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 LPIN3Q9BQK8 851 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 PYM1Q9BRP8 204 aaKnown RBP13.19□□□□□ -0.3
VPS16-208ENST00000487461 MKNK1Q9BUB5 465 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 ATXN3LQ9H3M9 355 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
VPS16-208ENST00000487461 LMAN1LQ9HAT1 526 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 HSFX1Q9UBD0 423 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 GAP43P17677 238 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 GABRR2P28476 465 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 TUFMP49411 452 aaKnown RBP13.18□□□□□ -0.3
VPS16-208ENST00000487461 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
VPS16-208ENST00000487461 SCARA3Q6AZY7 606 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 METTL23Q86XA0 190 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 YAF2Q8IY57 180 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 KIAA2013Q8IYS2 634 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 THEM5Q8N1Q8 247 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 ZBTB44Q8NCP5 570 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 ATRIPQ8WXE1 791 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 RUBCNQ92622 972 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 HVCN1Q96D96 273 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 ACCSQ96QU6 501 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
VPS16-208ENST00000487461 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 DSEQ9UL01 958 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 MTMR6Q9Y217 621 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 PCDHGA2Q9Y5H1 932 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 PIAS3Q9Y6X2 628 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 SCN1AP35498 2009 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 WDR87Q6ZQQ6 2873 aa13.18□□□□□ -0.3
VPS16-208ENST00000487461 ZNF292O60281 2723 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 A0A087X0B3 334 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 KPNA7A9QM74 516 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 CHADO15335 359 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 IL18RAPO95256 599 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 CHRNB1P11230 501 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 ATF6P18850 670 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 CCNE1P24864 410 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 SOX9P48436 509 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 CASP5P51878 434 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 FCHO2Q0JRZ9 810 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 SLC39A14Q15043 492 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 MGAT5BQ3V5L5 792 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 GPR158Q5T848 1215 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 ITIH5Q86UX2 942 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 GIPC2Q8TF65 315 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 USP28Q96RU2 1077 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 HINFPQ9BQA5 517 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 FGFBP2Q9BYJ0 223 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 CHRDQ9H2X0 955 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 IL21Q9HBE4 155 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 PRMT8Q9NR22 394 aaPredicted RBP13.17□□□□□ -0.3
VPS16-208ENST00000487461 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
VPS16-208ENST00000487461 FRMD3A2A2Y4 597 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
VPS16-208ENST00000487461 LILRB5O75023 590 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 GCNT3O95395 438 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 FGF19O95750 216 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
VPS16-208ENST00000487461 TDGF1P13385 188 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 IDEP14735 1019 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 TXLNAP40222 546 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 STAT6P42226 847 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 MLLT6P55198 1093 aaPredicted RBP13.16□□□□□ -0.3
VPS16-208ENST00000487461 CYP4F8P98187 520 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
VPS16-208ENST00000487461 FOXK2Q01167 660 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 SV2CQ496J9 727 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 NT5DC4Q86YG4 428 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 TTC8Q8TAM2 541 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 CSGALNACT1Q8TDX6 532 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 RMDN1Q96DB5 314 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 SAAL1Q96ER3 474 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 INTS4Q96HW7 963 aaKnown RBP13.16□□□□□ -0.3
VPS16-208ENST00000487461 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 SLC46A2Q9BY10 475 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 TASP1Q9H6P5 420 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 OLFML3Q9NRN5 406 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 PANK4Q9NVE7 773 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 TMLHEQ9NVH6 421 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 AGAP1Q9UPQ3 857 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
VPS16-208ENST00000487461 MORC2Q9Y6X9 1032 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms