RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CHST8Q9H2A9 424 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 ZCCHC4Q9H5U6 513 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 XPR1Q9UBH6 696 aa6□□□□□ -1.45
PRPF38A-203ENST00000487160 ARHGEF11O15085 1522 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 CEP164Q9UPV0 1460 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 CAPN14A8MX76 684 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 VPS4BO75351 444 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 ANXA2P07355 339 aaKnown RBP5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 FGFR2P21802 821 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 FDXRP22570 491 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 GCSHP23434 173 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 RABGGTBP53611 331 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 NHLH2Q02577 135 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 DCAF17Q5H9S7 520 aaPredicted RBP5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 FAM102AQ5T9C2 384 aaPredicted RBP5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 FAM160B1Q5W0V3 765 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 ANO1Q5XXA6 986 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 TSHZ3Q63HK5 1081 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 TXLNBQ8N3L3 684 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 ZNF808Q8N4W9 903 aaPredicted RBP5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 NEU1Q99519 415 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 MNTQ99583 582 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 CNPPD1Q9BV87 410 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 SSBP3Q9BWW4 388 aaPredicted RBP5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 SIK2Q9H0K1 926 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 SERHLQ9NQF3 203 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 MYO1AQ9UBC5 1043 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 ITGB1BP2Q9UKP3 347 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 CDYLQ9Y232 598 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 CEP83Q9Y592 693 aa5.99□□□□□ -1.45
PRPF38A-203ENST00000487160 MROH2BQ7Z745 1585 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 MBD3L4A6NDZ8 208 aaPredicted RBP5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 MBD3L3A6NE82 208 aaPredicted RBP5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 POLRMTO00411 1230 aaKnown RBP5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 NBNO60934 754 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 IL1R1P14778 569 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 COMTP21964 271 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 TECP42680 631 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 HSPA7P48741 367 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 CARSP49589 748 aaKnown RBP5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 TNFAIP2Q03169 654 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 TCF15Q12870 199 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 MPEG1Q2M385 716 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 SLC35G1Q2M3R5 365 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 TUBB8Q3ZCM7 444 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 INO80DQ53TQ3 878 aaPredicted RBP5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 SPOCD1Q6ZMY3 1216 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 Q6ZSN1 163 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 RNF44Q7L0R7 432 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 PPP1R32Q7Z5V6 425 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 SIAH1Q8IUQ4 282 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 SYTL1Q8IYJ3 562 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 CFAP52Q8N1V2 620 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 NSUN7Q8NE18 718 aaKnown RBP5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 DNERQ8NFT8 737 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 Q8TCH9 128 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 ZNF566Q969W8 418 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 SPATA5L1Q9BVQ7 753 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 GPR87Q9BY21 358 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 MS4A7Q9GZW8 240 aaPredicted RBP5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 TBC1D23Q9NUY8 699 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 VSX1Q9NZR4 365 aaPredicted RBP5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 HESX1Q9UBX0 185 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 PAXBP1Q9Y5B6 917 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 PRDM2Q13029 1718 aa5.98□□□□□ -1.45
PRPF38A-203ENST00000487160 A0A087WV62 115 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 CCDC78A2IDD5 438 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 GOLGA6L6A8MZA4 724 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 PATE3B3GLJ2 98 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 ADAMTS3O15072 1205 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 THAP12O43422 761 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 CREB3O43889 395 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 RASSF9O75901 435 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 KLRC1P26715 233 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 APOBEC3AP31941 199 aaPredicted RBP5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 BOP1Q14137 746 aaKnown RBP5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 AGAP9Q5VTM2 703 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 RRAGBQ5VZM2 374 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 NAIF1Q69YI7 327 aaPredicted RBP5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 CCDC174Q6PII3 467 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 ZDHHC24Q6UX98 284 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 MAMDC4Q6UXC1 1216 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 SLC30A10Q6XR72 485 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 Q6ZRM9 215 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 RAPGEF4Q8WZA2 1011 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 LRIG1Q96JA1 1093 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 TTLL2Q9BWV7 592 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 REXO4Q9GZR2 422 aaKnown RBP5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 PARD6AQ9NPB6 346 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 ETAA1Q9NY74 926 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 TBC1D30Q9Y2I9 924 aa5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 USP15Q9Y4E8 981 aaPredicted RBP5.97□□□□□ -1.45
PRPF38A-203ENST00000487160 CHD1O14646 1710 aa5.96□□□□□ -1.45
PRPF38A-203ENST00000487160 AATKQ6ZMQ8 1374 aa5.96□□□□□ -1.45
PRPF38A-203ENST00000487160 ZNF185O15231 689 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 TXNP10599 105 aaKnown RBP5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 ACO1P21399 889 aaKnown RBP5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 EEF1GP26641 437 aaKnown RBP5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 HALP42357 657 aa5.96□□□□□ -1.46
PRPF38A-203ENST00000487160 TOB1P50616 345 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms