RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RIOX1Q9H6W3 641 aa5.13□□□□□ -1.59
SNRNP40-205ENST00000486941 BABAM1Q9NWV8 329 aa5.13□□□□□ -1.59
SNRNP40-205ENST00000486941 ABT1Q9ULW3 272 aaKnown RBP5.13□□□□□ -1.59
SNRNP40-205ENST00000486941 ZKSCAN5Q9Y2L8 839 aa5.13□□□□□ -1.59
SNRNP40-205ENST00000486941 ATP6V0A2Q9Y487 856 aa5.13□□□□□ -1.59
SNRNP40-205ENST00000486941 LTBP1Q14766 1721 aa5.13□□□□□ -1.59
SNRNP40-205ENST00000486941 UBN2Q6ZU65 1347 aa5.13□□□□□ -1.59
SNRNP40-205ENST00000486941 LAMB2P55268 1798 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 TAF1P21675 1872 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 ZAR1LA6NP61 321 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 TCERG1O14776 1098 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 NRP1O14786 923 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 PPIP5K2O43314 1243 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 RECQL4O94761 1208 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 NDUFA10O95299 355 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 GYPEP15421 78 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 MAP2K2P36507 400 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 CXCL9Q07325 125 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 MGAT5Q09328 741 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 TERF2Q15554 542 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 PDCD4Q53EL6 469 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 HSP90AB3PQ58FF7 597 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 CST9Q5W186 159 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 LRRTM3Q86VH5 581 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 CEP95Q96GE4 821 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 CAPNS2Q96L46 248 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 GPR101Q96P66 508 aaPredicted RBP5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 THUMPD2Q9BTF0 503 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 ANO3Q9BYT9 981 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 EPC1Q9H2F5 836 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 ADARB2Q9NS39 739 aaKnown RBP5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 GPRC5DQ9NZD1 345 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 PGAP2Q9UHJ9 254 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 PRSS50Q9UI38 385 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 CASP8AP2Q9UKL3 1982 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 MAPK8IP3Q9UPT6 1336 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 THSD7BQ9C0I4 1608 aa5.12□□□□□ -1.59
SNRNP40-205ENST00000486941 CLEC2LP0C7M8 214 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 EIF2S2P20042 333 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 PLA2G5P39877 138 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 NEK4P51957 841 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 MANFP55145 182 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 WNT3AP56704 352 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 RIPK4P57078 832 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 PHC1P78364 1004 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 DUSP2Q05923 314 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 TNIP1Q15025 636 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 CCDC144BQ3MJ40 725 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 GPR158Q5T848 1215 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 FAM102AQ5T9C2 384 aaPredicted RBP5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 ADGRG3Q86Y34 549 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 ZNF610Q8N9Z0 462 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 FAM98AQ8NCA5 519 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 LINC00476Q8WZB0 136 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 ABHD8Q96I13 439 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 ZSWIM4Q9H7M6 989 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 USP36Q9P275 1121 aaKnown RBP5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 TSPYL4Q9UJ04 414 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 MAP3K2Q9Y2U5 619 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 NUMBLQ9Y6R0 609 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 ABCC4O15439 1325 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 SALL3Q9BXA9 1300 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 CDHR2Q9BYE9 1310 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 PDE4DIPQ5VU43 2346 aa5.11□□□□□ -1.59
SNRNP40-205ENST00000486941 UNC119BA6NIH7 251 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 MARCH11A6NNE9 402 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 MASP2O00187 686 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 MAFGO15525 162 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 CA12O43570 354 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 GAS7O60861 476 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 ZNF37AP17032 561 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 ADCYAP1R1P41586 468 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 GMPSP49915 693 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 C21orf58P58505 322 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 PPARAQ07869 468 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 LMOD3Q0VAK6 560 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 SCAPQ12770 1279 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 GRAPQ13588 217 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 TP53BP2Q13625 1128 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 PROSER3Q2NL68 480 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 MFSD14BQ5SR56 506 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 IQSEC1Q6DN90 963 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 CNNM4Q6P4Q7 775 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 DDX46Q7L014 1031 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 COPS6Q7L5N1 327 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 RNF169Q8NCN4 708 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 GRAPLQ8TC17 118 aaPredicted RBP5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 SH3TC1Q8TE82 1336 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 ASB10Q8WXI3 467 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 FERMT2Q96AC1 680 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 TARS2Q9BW92 718 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 PTGFRNQ9P2B2 879 aa5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 TRMT112Q9UI30 125 aaKnown RBP5.1□□□□□ -1.59
SNRNP40-205ENST00000486941 AKAP11Q9UKA4 1901 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 CHL1O00533 1208 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 RNASET2O00584 256 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 CELF2O95319 508 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 ANXA1P04083 346 aa5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 TMPOP42166 694 aaKnown RBP5.09□□□□□ -1.59
SNRNP40-205ENST00000486941 GPR15P49685 360 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms