RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DNAJC24Q6P3W2 148 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 TAOK1Q7L7X3 1001 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 SEC16BQ96JE7 1060 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 SERPINB12Q96P63 405 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 PTPRHQ9HD43 1115 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 PCDHGC3Q9UN70 934 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 ACKR2O00590 384 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 NF2P35240 595 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 TFAMQ00059 246 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 TAP1Q03518 808 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 IFT88Q13099 833 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 ZNF699Q32M78 642 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 ZNF394Q53GI3 561 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 GPAT2Q6NUI2 795 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 RHPN2Q8IUC4 686 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 MCEEQ96PE7 176 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 SLITRK1Q96PX8 696 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 FAM118BQ9BPY3 351 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 FZD8Q9H461 694 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 CXCL11O14625 94 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 B4GALT4O60513 344 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 EIF4BP23588 611 aaKnown RBP19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 ASPAP45381 313 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 VPS41P49754 854 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 LMNB2Q03252 620 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 TFDP1Q14186 410 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 LONRF1Q17RB8 773 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 ATP13A4Q4VNC1 1196 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 PPP1R15BQ5SWA1 713 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 ATF7IP2Q5U623 682 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 CPLX4Q7Z7G2 160 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 PACS2Q86VP3 889 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 ERO1BQ86YB8 467 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 DHX37Q8IY37 1157 aaKnown RBP19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 SPATA33Q96N06 139 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 ZNF317Q96PQ6 595 aaPredicted RBP19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 XYLT2Q9H1B5 865 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 INTS9Q9NV88 658 aaKnown RBP19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 AGTPBP1Q9UPW5 1226 aa19.03■□□□□ 0.64
PDLIM7-207ENST00000486828 DNAJC25-GNG10A0A024R161 153 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 FSBPO95073 299 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 TNNC2P02585 160 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 KRT1P04264 644 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 WEE2P0C1S8 567 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 TCF4P15884 667 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 KLRC2P26717 231 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 SLC26A2P50443 739 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 RNF187Q5TA31 235 aaPredicted RBP19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 GKAP1Q5VSY0 366 aaPredicted RBP19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 IZUMO3Q5VZ72 239 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 THNSL1Q8IYQ7 743 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 CACNA2D3Q8IZS8 1091 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 WDTC1Q8N5D0 677 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 TFAP2BQ92481 460 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 ANKRD36BP1Q96IX9 119 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 CCDC134Q9H6E4 229 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 TXNRD2Q9NNW7 524 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 KLHL11Q9NVR0 708 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 CLEC11AQ9Y240 323 aa19.02■□□□□ 0.64
PDLIM7-207ENST00000486828 PI4K2BG5E9Z4 385 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 LIASO43766 372 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 COPS2P61201 443 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 YWHAEP62258 255 aaKnown RBP19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 OGDHQ02218 1023 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 PIGHQ14442 188 aaPredicted RBP19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 KYNUQ16719 465 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 CCDC62Q6P9F0 684 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 DRICH1Q6PGQ1 229 aaPredicted RBP19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 DCUN1D2Q6PH85 259 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 SCARA5Q6ZMJ2 495 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 EXOC3L1Q86VI1 746 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 RELL1Q8IUW5 271 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 CABS1Q96KC9 395 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 NLRP4Q96MN2 994 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 MMP19Q99542 508 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 SMARCAD1Q9H4L7 1026 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 DNAJC17Q9NVM6 304 aaKnown RBP19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 NINJ2Q9NZG7 142 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 RBPJLQ9UBG7 517 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 CEP83Q9Y592 693 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 IVNS1ABPQ9Y6Y0 642 aa19.02■□□□□ 0.63
PDLIM7-207ENST00000486828 F8VP50 259 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 TCEA3O75764 348 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 TJP3O95049 919 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 KRT10P13645 584 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 ATP5DP30049 168 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 PTPN7P35236 360 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 KCTD2Q14681 263 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 ZFYVE27Q5T4F4 411 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 HIBCHQ6NVY1 386 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 MFSD7Q6UXD7 560 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 GSTA5Q7RTV2 222 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 ERICH1Q86X53 443 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 FBXO16Q8IX29 292 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 NIPA2Q8N8Q9 360 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 CCHCR1Q8TD31 782 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 TRAPPC12Q8WVT3 735 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 CLMNQ96JQ2 1002 aa19.01■□□□□ 0.63
PDLIM7-207ENST00000486828 SPDYE5A6NIY4 337 aa19■□□□□ 0.63
PDLIM7-207ENST00000486828 INO80B-WBP1J3KQ70 363 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms