RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ROR1Q01973 937 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 SPEM2Q0P670 501 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 LPAL2Q16609 132 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 UPP1Q16831 310 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 L1TD1Q5T7N2 865 aaKnown RBP19.09■□□□□ 0.65
MCF2L-226ENST00000486210 SCFD1Q8WVM8 642 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 CCDC47Q96A33 483 aaKnown RBP19.09■□□□□ 0.65
MCF2L-226ENST00000486210 UROC1Q96N76 676 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 TARS2Q9BW92 718 aaKnown RBP19.09■□□□□ 0.65
MCF2L-226ENST00000486210 GMEB2Q9UKD1 530 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.09■□□□□ 0.65
MCF2L-226ENST00000486210 F5P12259 2224 aa19.09■□□□□ 0.65
MCF2L-226ENST00000486210 PDCD11Q14690 1871 aaKnown RBP19.09■□□□□ 0.65
MCF2L-226ENST00000486210 WDR27A2RRH5 827 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 PTPN2P17706 415 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 STRN3Q13033 797 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 MORC3Q14149 939 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 ZNF568Q3ZCX4 644 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 FAM78AQ5JUQ0 283 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 SLC8B1Q6J4K2 584 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 MAMSTRQ6ZN01 415 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 RBM43Q6ZSC3 357 aaKnown RBP19.08■□□□□ 0.64
MCF2L-226ENST00000486210 ANKS3Q6ZW76 656 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 MAP4K3Q8IVH8 894 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 ZNF507Q8TCN5 953 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 MRPL4Q9BYD3 311 aaKnown RBP19.08■□□□□ 0.64
MCF2L-226ENST00000486210 RMND1Q9NWS8 449 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 TNFSF13BQ9Y275 285 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 PCDHB13Q9Y5F0 798 aa19.08■□□□□ 0.64
MCF2L-226ENST00000486210 NCANO14594 1321 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 TISP43B9A030 160 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 EIF3DO15371 548 aaKnown RBP eCLIP19.07■□□□□ 0.64
MCF2L-226ENST00000486210 ABLIM3O94929 683 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 SOX4Q06945 474 aaPredicted RBP19.07■□□□□ 0.64
MCF2L-226ENST00000486210 ZNF658Q5TYW1 1059 aaPredicted RBP19.07■□□□□ 0.64
MCF2L-226ENST00000486210 SLC39A4Q6P5W5 647 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 NELFCDQ8IXH7 590 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 ZNF461Q8TAF7 563 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 ZBTB45Q96K62 511 aaPredicted RBP19.07■□□□□ 0.64
MCF2L-226ENST00000486210 ACO2Q99798 780 aaKnown RBP19.07■□□□□ 0.64
MCF2L-226ENST00000486210 CORO1BQ9BR76 489 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 BRD9Q9H8M2 597 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 ZFP14Q9HCL3 533 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 SLC38A7Q9NVC3 462 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 MAPK8IP1Q9UQF2 711 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 RALGAPA1Q6GYQ0 2036 aa19.07■□□□□ 0.64
MCF2L-226ENST00000486210 MAP1BP46821 2468 aaKnown RBP19.06■□□□□ 0.64
MCF2L-226ENST00000486210 ANKRD63C9JTQ0 380 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 MAN2B1O00754 1011 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 SEC24AO95486 1093 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 LRG1P02750 347 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 GRM5P41594 1212 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 ALCAMQ13740 583 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 GAS6Q14393 721 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 VITQ6UXI7 678 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 HVCN1Q96D96 273 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 ASB16Q96NS5 453 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 ACCSQ96QU6 501 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 TCHPQ9BT92 498 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 HAPLN2Q9GZV7 340 aa19.06■□□□□ 0.64
MCF2L-226ENST00000486210 ZNF334Q9HCZ1 680 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-226ENST00000486210 ABLIM1O14639 778 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 MOSPD3O75425 235 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 PIGRP01833 764 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 CD44P16070 742 aaKnown RBP19.05■□□□□ 0.64
MCF2L-226ENST00000486210 SCP2P22307 547 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 PRCPP42785 496 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 NRLP54845 237 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 BMT2Q1RMZ1 405 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 SKOR2Q2VWA4 1001 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-226ENST00000486210 LAIR1Q6GTX8 287 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 CELF5Q8N6W0 485 aaKnown RBP19.05■□□□□ 0.64
MCF2L-226ENST00000486210 CEP120Q8N960 986 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 FAM3CQ92520 227 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 BICD1Q96G01 975 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 ZSWIM3Q96MP5 696 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 TRMT61BQ9BVS5 477 aaKnown RBP19.05■□□□□ 0.64
MCF2L-226ENST00000486210 CDT1Q9H211 546 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 LMAN1LQ9HAT1 526 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 PTPRHQ9HD43 1115 aa19.05■□□□□ 0.64
MCF2L-226ENST00000486210 SMIM28A0A1B0GU29 152 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 SLC30A4O14863 429 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 TGFB1I1O43294 461 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 MICAL2O94851 1124 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 CHRNB1P11230 501 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 ATF2P15336 505 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 PROZP22891 400 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 OSTNP61366 133 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 SATB1Q01826 763 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 DMWDQ09019 674 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 ST3GAL2Q16842 350 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 PPM1JQ5JR12 505 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 STXBP4Q6ZWJ1 553 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 HS6ST3Q8IZP7 471 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 NETO1Q8TDF5 533 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 IRF7Q92985 503 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 ACAP3Q96P50 834 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 IER2Q9BTL4 223 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 CYP4F11Q9HBI6 524 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms