RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SMARCB1Q12824 385 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 SLC39A12Q504Y0 691 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 CBWD2Q8IUF1 395 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 LRRC52Q8N7C0 313 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 PAGE5Q96GU1 130 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 KXD1Q9BQD3 176 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 SLC39A2Q9NP94 309 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 AGPAT3Q9NRZ7 376 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 INTS13Q9NVM9 706 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 ASB3Q9Y575 518 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 DOCK6Q96HP0 2047 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 MYH15Q9Y2K3 1946 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 A0A1B0GVL5 298 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 ACTN4O43707 911 aaKnown RBP19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 MOSPD3O75425 235 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 TMEM191BP0C7N4 346 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 TUFMP49411 452 aaKnown RBP19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 SCARA3Q6AZY7 606 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 TANGO2Q6ICL3 276 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 PHLDB3Q6NSJ2 640 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 NELFCDQ8IXH7 590 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 GRAMD1CQ8IYS0 662 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 ANKRD36BP1Q96IX9 119 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 CHAMP1Q96JM3 812 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 LRRC3Q9BY71 257 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 DNAJC25Q9H1X3 360 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 ARHGEF3Q9NR81 526 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 USP25Q9UHP3 1055 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 SIX4Q9UIU6 781 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 ATP6V1DQ9Y5K8 247 aa19.83■□□□□ 0.77
PRPF40A-209ENST00000486100 WDFY4Q6ZS81 3184 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 NOTCH4Q99466 2003 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 NRG2O14511 850 aaPredicted RBP19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 CLIC2O15247 247 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 HUS1O60921 280 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 KRT19P08727 400 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 PFKFB1P16118 471 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 DUOXA2Q1HG44 320 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 BMT2Q1RMZ1 405 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 HS2ST1Q7LGA3 356 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 DNAJB7Q7Z6W7 309 aaPredicted RBP19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 LRRTM3Q86VH5 581 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 DCP1BQ8IZD4 617 aaKnown RBP19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 TTC9BQ8N6N2 239 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 RDH13Q8NBN7 331 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 C2orf15Q8WU43 125 aaKnown RBP19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 ELSPBP1Q96BH3 223 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 FAM84AQ96KN4 292 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 PLA2G2FQ9BZM2 168 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 MTMR12Q9C0I1 747 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 GPR88Q9GZN0 384 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 GDAP2Q9NXN4 497 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 CGNQ9P2M7 1197 aaKnown RBP19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 HPSEQ9Y251 543 aa19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 R3HCC1Q9Y3T6 440 aaKnown RBP19.82■□□□□ 0.76
PRPF40A-209ENST00000486100 KLRC4O43908 158 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 TNNC2P02585 160 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 GJA1P17302 382 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 RFX1P22670 979 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 STARD6P59095 220 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 PFKPQ01813 784 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 BFSP1Q12934 665 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 SNRNP35Q16560 246 aaKnown RBP19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 KNOP1Q1ED39 458 aaKnown RBP19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 FAM78AQ5JUQ0 283 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 LMBRD2Q68DH5 695 aaPredicted RBP19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 ALYREFQ86V81 257 aaKnown RBP19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 TMC8Q8IU68 726 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 TMEM86AQ8N2M4 240 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 PDCL2Q8N4E4 241 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 XXYLT1Q8NBI6 393 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 OR5B17Q8NGF7 314 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 SPPL2BQ8TCT7 592 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 PSMG2Q969U7 264 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 SHDQ96IW2 340 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 ZSWIM3Q96MP5 696 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 ASB16Q96NS5 453 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 SCAND2PQ9GZW5 306 aaPredicted RBP19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 TBC1D17Q9HA65 648 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 ZFP14Q9HCL3 533 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 L1RE1Q9UN81 338 aa19.81■□□□□ 0.76
PRPF40A-209ENST00000486100 H0Y858 1186 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 SOAT2O75908 522 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 FCARP24071 287 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 MYO1EQ12965 1108 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 PSMD2Q13200 908 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 TEAD2Q15562 447 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 MGAT5BQ3V5L5 792 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 SLC44A4Q53GD3 710 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 ITIH5Q86UX2 942 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 WDR49Q8IV35 697 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 C12orf56Q8IXR9 622 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 SHKBP1Q8TBC3 707 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 SPATA18Q8TC71 538 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 SMARCD2Q92925 531 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 SEPT5Q99719 369 aaPredicted RBP19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 ACBD6Q9BR61 282 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 SNX9Q9Y5X1 595 aa19.8■□□□□ 0.76
PRPF40A-209ENST00000486100 PTPRJQ12913 1337 aa19.79■□□□□ 0.76
PRPF40A-209ENST00000486100 FAM237AA0A1B0GTK4 181 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms