RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 HAPLN3Q96S86 360 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 VRK1Q99986 396 aaPredicted RBP5.28□□□□□ -1.56
GCFC2-209ENST00000486016 CCDC8Q9H0W5 538 aaPredicted RBP5.28□□□□□ -1.56
GCFC2-209ENST00000486016 SMOC2Q9H3U7 446 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 GPR35Q9HC97 309 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 RLIMQ9NVW2 624 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 ZNF70Q9UC06 446 aaPredicted RBP5.28□□□□□ -1.56
GCFC2-209ENST00000486016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.28□□□□□ -1.56
GCFC2-209ENST00000486016 CFAP20Q9Y6A4 193 aaKnown RBP5.28□□□□□ -1.56
GCFC2-209ENST00000486016 WNT6Q9Y6F9 365 aa5.28□□□□□ -1.56
GCFC2-209ENST00000486016 GCOM1H8Y6P7 765 aaPredicted RBP5.27□□□□□ -1.57
GCFC2-209ENST00000486016 LATS1O95835 1130 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 MYBL2P10244 700 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 CYP2C19P33261 490 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 ZNF81P51508 661 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 HABP2Q14520 560 aaPredicted RBP5.27□□□□□ -1.57
GCFC2-209ENST00000486016 ODF1Q14990 250 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 PREPLQ4J6C6 727 aaPredicted RBP5.27□□□□□ -1.57
GCFC2-209ENST00000486016 KIAA1614Q5VZ46 1190 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 PPP4R3AQ6IN85 833 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 RASAL3Q86YV0 1011 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
GCFC2-209ENST00000486016 B3GALNT2Q8NCR0 500 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 SEMA6DQ8NFY4 1073 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 SMOQ99835 787 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 FLRT1Q9NZU1 646 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 SERGEFQ9UGK8 458 aa5.27□□□□□ -1.57
GCFC2-209ENST00000486016 A0A0B4J269 797 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 WDR91A4D1P6 747 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 POLRMTO00411 1230 aaKnown RBP5.26□□□□□ -1.57
GCFC2-209ENST00000486016 URI1O94763 535 aaPredicted RBP5.26□□□□□ -1.57
GCFC2-209ENST00000486016 GJB1P08034 283 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 ADKP55263 362 aaKnown RBP5.26□□□□□ -1.57
GCFC2-209ENST00000486016 TUBB3Q13509 450 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 TAF2Q6P1X5 1199 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 SLC4A10Q6U841 1118 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 TTC7BQ86TV6 843 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 FAM90A1Q86YD7 464 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 AOPEPQ8N6M6 819 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 KRTAP1-5Q9BYS1 174 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 SLC29A3Q9BZD2 475 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 SERTAD4Q9NUC0 356 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 DKK3Q9UBP4 350 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 AGAP1Q9UPQ3 857 aa5.26□□□□□ -1.57
GCFC2-209ENST00000486016 SHTN1A0MZ66 631 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 LINC01548A6NM66 108 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 XPOTO43592 962 aaKnown RBP5.25□□□□□ -1.57
GCFC2-209ENST00000486016 ZRANB2O95218 330 aaKnown RBP eCLIP5.25□□□□□ -1.57
GCFC2-209ENST00000486016 JUPP14923 745 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 DRD4P21917 467 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 PRDX5P30044 214 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 NDUFV1P49821 464 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 CDKN1CP49918 316 aaPredicted RBP5.25□□□□□ -1.57
GCFC2-209ENST00000486016 EXOSC10Q01780 885 aaKnown RBP5.25□□□□□ -1.57
GCFC2-209ENST00000486016 MAPK7Q13164 816 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 SLC30A10Q6XR72 485 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 PPP1R32Q7Z5V6 425 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 PSD4Q8NDX1 1056 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 ALG8Q9BVK2 526 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 BRD9Q9H8M2 597 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 SPC25Q9HBM1 224 aa5.25□□□□□ -1.57
GCFC2-209ENST00000486016 LRRC14BA6NHZ5 514 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 F5H697 171 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 CHEK2O96017 543 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 NR2F6P10588 404 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 KIF22Q14807 665 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 ZNF782Q6ZMW2 699 aaPredicted RBP5.24□□□□□ -1.57
GCFC2-209ENST00000486016 C9orf106Q8NAJ2 232 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 SLC13A1Q9BZW2 595 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 MAN1C1Q9NR34 630 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 EHD3Q9NZN3 535 aa5.24□□□□□ -1.57
GCFC2-209ENST00000486016 TNKSO95271 1327 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 ZNF785A8K8V0 405 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 IKBKBO14920 756 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 TRIAP1O43715 76 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 TTLL1O95922 423 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 RPLP2P05387 115 aaKnown RBP5.23□□□□□ -1.57
GCFC2-209ENST00000486016 CDK11BP21127 795 aaKnown RBP5.23□□□□□ -1.57
GCFC2-209ENST00000486016 GUCY2FP51841 1108 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
GCFC2-209ENST00000486016 PSMC1P62191 440 aaKnown RBP5.23□□□□□ -1.57
GCFC2-209ENST00000486016 LLGL1Q15334 1064 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 FKBP10Q96AY3 582 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 REPS1Q96D71 796 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 C1orf43Q9BWL3 253 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 BRIP1Q9BX63 1249 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 ACTRT3Q9BYD9 372 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 TPSD1Q9BZJ3 242 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 SERHLQ9NQF3 203 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 CFAP97Q9P2B7 532 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 MRFAP1Q9Y605 127 aa5.23□□□□□ -1.57
GCFC2-209ENST00000486016 TARM1B6A8C7 271 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 ZNF213O14771 459 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 KATNA1O75449 491 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 SOAT2O75908 522 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 FTH1P19P0C7X4 201 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 RARBP10826 455 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 ZFXP17010 805 aaPredicted RBP5.22□□□□□ -1.57
GCFC2-209ENST00000486016 CCT8P50990 548 aa5.22□□□□□ -1.57
GCFC2-209ENST00000486016 ZNF135P52742 658 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms