RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 RASA2Q15283 850 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 RNASEH2BQ5TBB1 312 aaKnown RBP23.76■■□□□ 1.39
CLN5-202ENST00000485938 RBBP8NLQ8NC74 664 aaPredicted RBP23.76■■□□□ 1.39
CLN5-202ENST00000485938 MCPH1Q8NEM0 835 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 SLC7A6OSQ96CW6 309 aaPredicted RBP23.76■■□□□ 1.39
CLN5-202ENST00000485938 CNTN6Q9UQ52 1028 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 DRG1Q9Y295 367 aaKnown RBP23.76■■□□□ 1.39
CLN5-202ENST00000485938 WDR46O15213 610 aaKnown RBP23.76■■□□□ 1.39
CLN5-202ENST00000485938 CHRNA5P30532 468 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 LIG4P49917 911 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 CAPN12Q6ZSI9 719 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 ZBED8Q8IZ13 594 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 RNPEPL1Q9HAU8 725 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 SLC24A2Q9UI40 661 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 IVNS1ABPQ9Y6Y0 642 aa23.76■■□□□ 1.39
CLN5-202ENST00000485938 A0A1W2PPM1 405 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 TMEM191CA6NGB0 347 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 DGAT1O75907 488 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 TMEM191BP0C7N4 346 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 GNAZP19086 355 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 ACOT2P49753 483 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 MCL1Q07820 350 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 OASLQ15646 514 aaKnown RBP23.75■■□□□ 1.39
CLN5-202ENST00000485938 SPOCD1Q6ZMY3 1216 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 NLRX1Q86UT6 975 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 FAM13CQ8NE31 585 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 ANKRD27Q96NW4 1050 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 PPCSQ9HAB8 311 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 CYLDQ9NQC7 956 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 PSME4Q14997 1843 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 PEX11AO75192 247 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 FGFR1P11362 822 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 RXRBP28702 533 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 VCPP55072 806 aaKnown RBP23.75■■□□□ 1.39
CLN5-202ENST00000485938 ZNF252P-AS1Q0IIN9 211 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 ARHGEF16Q5VV41 709 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 PPP1R2P3Q6NXS1 205 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 KCNV2Q8TDN2 545 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 ATP6V0A1Q93050 837 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 GMLQ99445 158 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 MAK16Q9BXY0 300 aaKnown RBP23.75■■□□□ 1.39
CLN5-202ENST00000485938 SHOC2Q9UQ13 582 aa23.75■■□□□ 1.39
CLN5-202ENST00000485938 MMP8P22894 467 aa23.74■■□□□ 1.39
CLN5-202ENST00000485938 WDR72Q3MJ13 1102 aa23.74■■□□□ 1.39
CLN5-202ENST00000485938 ZFYVE27Q5T4F4 411 aa23.74■■□□□ 1.39
CLN5-202ENST00000485938 LRRC38Q5VT99 294 aa23.74■■□□□ 1.39
CLN5-202ENST00000485938 HHATQ5VTY9 493 aa23.74■■□□□ 1.39
CLN5-202ENST00000485938 POLR3FQ9H1D9 316 aaPredicted RBP23.74■■□□□ 1.39
CLN5-202ENST00000485938 PSMC3IPQ9P2W1 217 aaPredicted RBP23.74■■□□□ 1.39
CLN5-202ENST00000485938 STYXL1Q9Y6J8 313 aa23.74■■□□□ 1.39
CLN5-202ENST00000485938 ZNF541Q9H0D2 1346 aa23.74■■□□□ 1.39
CLN5-202ENST00000485938 GM2AP17900 193 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 CALB2P22676 271 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 HMGB2P26583 209 aaKnown RBP23.73■■□□□ 1.39
CLN5-202ENST00000485938 CDC25CP30307 473 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 FKBP1CQ5VVH2 108 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 CENPUQ71F23 418 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 OTOAQ7RTW8 1153 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 MRRFQ96E11 262 aaKnown RBP23.73■■□□□ 1.39
CLN5-202ENST00000485938 TBC1D10AQ9BXI6 508 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 AGO2Q9UKV8 859 aaKnown RBP23.73■■□□□ 1.39
CLN5-202ENST00000485938 PDIA2Q13087 525 aaKnown RBP23.73■■□□□ 1.39
CLN5-202ENST00000485938 EFHC2Q5JST6 749 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 SPDYAQ5MJ70 313 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 ZNF75CPQ92670 426 aaPredicted RBP23.73■■□□□ 1.39
CLN5-202ENST00000485938 NKD2Q969F2 451 aaPredicted RBP23.73■■□□□ 1.39
CLN5-202ENST00000485938 HAPLN2Q9GZV7 340 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 CYP39A1Q9NYL5 469 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 PGAP2Q9UHJ9 254 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 TELO2Q9Y4R8 837 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 NUB1Q9Y5A7 615 aa23.73■■□□□ 1.39
CLN5-202ENST00000485938 hCG_1818297A0A087WSY0 165 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 H0YCG3 227 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 TRAFD1O14545 582 aaPredicted RBP23.72■■□□□ 1.39
CLN5-202ENST00000485938 PTPN7P35236 360 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 GPX6P59796 221 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 DGKZQ13574 1117 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 SWSAP1Q6NVH7 229 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 ZNF449Q6P9G9 518 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 LVRNQ6Q4G3 990 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 LPAR1Q92633 364 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 ADAM33Q9BZ11 813 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 SSU72Q9NP77 194 aaKnown RBP23.72■■□□□ 1.39
CLN5-202ENST00000485938 F8VP50 259 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 LIN7AO14910 233 aaPredicted RBP23.72■■□□□ 1.39
CLN5-202ENST00000485938 SMNDC1O75940 238 aaKnown RBP eCLIP23.72■■□□□ 1.39
CLN5-202ENST00000485938 NEBLO76041 1014 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 CBX6O95503 412 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 ITGAVP06756 1048 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 NOP14P78316 857 aaKnown RBP23.72■■□□□ 1.39
CLN5-202ENST00000485938 RNASELQ05823 741 aaKnown RBP23.72■■□□□ 1.39
CLN5-202ENST00000485938 TAF11Q15544 211 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 TXNRD3NBQ6F5E7 133 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 LONP2Q86WA8 852 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 SUPT20HQ8NEM7 779 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 STK32AQ8WU08 396 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 HAUS1Q96CS2 278 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 PCDH9Q9HC56 1237 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 CYP26B1Q9NR63 512 aa23.72■■□□□ 1.39
CLN5-202ENST00000485938 SEPT9Q9UHD8 586 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms