RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 PTCRAQ6ISU1 281 aaPredicted RBP16.51■□□□□ 0.23
HDHD3-203ENST00000485934 SMRP1Q8NCR6 262 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 FBXL13Q8NEE6 735 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 VN1R2Q8NFZ6 395 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 C2orf15Q8WU43 125 aaKnown RBP16.51■□□□□ 0.23
HDHD3-203ENST00000485934 ACBD6Q9BR61 282 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 HSFX1Q9UBD0 423 aa16.51■□□□□ 0.23
HDHD3-203ENST00000485934 MAGEC2Q9UBF1 373 aaPredicted RBP16.51■□□□□ 0.23
HDHD3-203ENST00000485934 PLXNA4Q9HCM2 1894 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 PRRG1O14668 218 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 P4HA2O15460 535 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 XYLBO75191 536 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 TACC1O75410 805 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 MXI1P50539 228 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 ROR1Q01973 937 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 DLX2Q07687 328 aaPredicted RBP16.5■□□□□ 0.23
HDHD3-203ENST00000485934 NFE2Q16621 373 aaPredicted RBP16.5■□□□□ 0.23
HDHD3-203ENST00000485934 STX1AQ16623 288 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 SOWAHAQ2M3V2 549 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 DPCR1Q3MIW9 517 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 TJAP1Q5JTD0 557 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 PPM1LQ5SGD2 360 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 ADGRF2Q8IZF7 708 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 TTC39CQ8N584 583 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 SNX25Q9H3E2 840 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 THAP9Q9H5L6 903 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 FAM124BQ9H5Z6 455 aaPredicted RBP16.5■□□□□ 0.23
HDHD3-203ENST00000485934 PRDM6Q9NQX0 595 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 NXF1Q9UBU9 619 aaKnown RBP16.5■□□□□ 0.23
HDHD3-203ENST00000485934 FBXW11Q9UKB1 542 aa16.5■□□□□ 0.23
HDHD3-203ENST00000485934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDHD3-203ENST00000485934 CCDC195A0A1B0GUA6 201 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 GRXCR2A6NFK2 248 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 GABRDO14764 452 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 PMM2O15305 246 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 ZMYND10O75800 440 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 TRIM49P0CI25 452 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 TRIM49CP0CI26 452 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 GNL1P36915 607 aaPredicted RBP16.49■□□□□ 0.23
HDHD3-203ENST00000485934 TUFMP49411 452 aaKnown RBP16.49■□□□□ 0.23
HDHD3-203ENST00000485934 TFF2Q03403 129 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 PPP3CAQ08209 521 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 PLD1Q13393 1074 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
HDHD3-203ENST00000485934 SYCE2Q6PIF2 218 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 LIMS2Q7Z4I7 341 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 TCEAL8Q8IYN2 117 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 ELMOD1Q8N336 334 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
HDHD3-203ENST00000485934 XYLT2Q9H1B5 865 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 S1PR5Q9H228 398 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 PIDD1Q9HB75 910 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 RAB20Q9NX57 234 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 DDX43Q9NXZ2 648 aaKnown RBP16.49■□□□□ 0.23
HDHD3-203ENST00000485934 PRKAG3Q9UGI9 489 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 L1RE1Q9UN81 338 aa16.49■□□□□ 0.23
HDHD3-203ENST00000485934 MBTPS2O43462 519 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 ASS1P00966 412 aaKnown RBP16.48■□□□□ 0.23
HDHD3-203ENST00000485934 HLA-DRAP01903 254 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 C8AP07357 584 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 POU2F2P09086 479 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 SPATA31D3P0C874 917 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 WARSP23381 471 aaKnown RBP16.48■□□□□ 0.23
HDHD3-203ENST00000485934 SMAD2Q15796 467 aaKnown RBP16.48■□□□□ 0.23
HDHD3-203ENST00000485934 C1orf220Q5T0J3 134 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 RSPO2Q6UXX9 243 aaPredicted RBP16.48■□□□□ 0.23
HDHD3-203ENST00000485934 SPATA31D4Q6ZUB0 917 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 GPR149Q86SP6 731 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 CREBRFQ8IUR6 639 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 TMEM130Q8N3G9 435 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 ENOX1Q8TC92 643 aaKnown RBP16.48■□□□□ 0.23
HDHD3-203ENST00000485934 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 SLC35C1Q96A29 364 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 PRKD2Q9BZL6 878 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 ZCWPW1Q9H0M4 648 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 CYP3A43Q9HB55 503 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 CYP4F11Q9HBI6 524 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 CDH9Q9ULB4 789 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 COQ4Q9Y3A0 265 aa16.48■□□□□ 0.23
HDHD3-203ENST00000485934 WDR27A2RRH5 827 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 ADAM12O43184 909 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 PAPLNO95428 1278 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 VNN1O95497 513 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 LRG1P02750 347 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
HDHD3-203ENST00000485934 ADCY1Q08828 1119 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 CBX2Q14781 532 aaPredicted RBP16.47■□□□□ 0.23
HDHD3-203ENST00000485934 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
HDHD3-203ENST00000485934 TRIM59Q8IWR1 403 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 OR6B3Q8NGW1 331 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 SLC7A14Q8TBB6 771 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 TNIP3Q96KP6 325 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
HDHD3-203ENST00000485934 AFPP02771 609 aaKnown RBP16.46■□□□□ 0.23
HDHD3-203ENST00000485934 TPM2P07951 284 aa16.46■□□□□ 0.23
HDHD3-203ENST00000485934 BMP1P13497 986 aa16.46■□□□□ 0.23
HDHD3-203ENST00000485934 ALDH1A3P47895 512 aa16.46■□□□□ 0.23
HDHD3-203ENST00000485934 FMO5P49326 533 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms