RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 STK4Q13043 487 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 PSMD2Q13200 908 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 KCNB1Q14721 858 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 POSTNQ15063 836 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 NFIL3Q16649 462 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 LMBRD2Q68DH5 695 aaPredicted RBP6.21□□□□□ -1.42
CUX1-208ENST00000485792 JADE1Q6IE81 842 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 SLC8B1Q6J4K2 584 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 ANKRD54Q6NXT1 300 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 CYP26C1Q6V0L0 522 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.21□□□□□ -1.42
CUX1-208ENST00000485792 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 RTL10Q7L3V2 364 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 TMC7Q7Z402 723 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 PPFIBP1Q86W92 1011 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 CBWD2Q8IUF1 395 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 SLC9A9Q8IVB4 645 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 CCDC65Q8IXS2 484 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 SMYD4Q8IYR2 804 aaPredicted RBP6.21□□□□□ -1.42
CUX1-208ENST00000485792 STKLD1Q8NE28 680 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 BEST2Q8NFU1 509 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 OR5B17Q8NGF7 314 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 PPP2R3CQ969Q6 453 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 SUSD3Q96L08 255 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 TIGD1Q96MW7 591 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 FAM193BQ96PV7 902 aaPredicted RBP6.21□□□□□ -1.42
CUX1-208ENST00000485792 ACCSQ96QU6 501 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 ADAM7Q9H2U9 754 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 KCTD10Q9H3F6 313 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 TMEM206Q9H813 350 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 MRPL44Q9H9J2 332 aaKnown RBP6.21□□□□□ -1.42
CUX1-208ENST00000485792 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.21□□□□□ -1.42
CUX1-208ENST00000485792 MRPL17Q9NRX2 175 aaKnown RBP6.21□□□□□ -1.42
CUX1-208ENST00000485792 SLC38A7Q9NVC3 462 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 CLDND1Q9NY35 253 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 FAM13BQ9NYF5 915 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 CGNQ9P2M7 1197 aaKnown RBP6.21□□□□□ -1.42
CUX1-208ENST00000485792 MTRRQ9UBK8 725 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 AGO2Q9UKV8 859 aaKnown RBP6.21□□□□□ -1.42
CUX1-208ENST00000485792 SSX2IPQ9Y2D8 614 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 BACE2Q9Y5Z0 518 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 SF3B1O75533 1304 aaKnown RBP eCLIP6.21□□□□□ -1.42
CUX1-208ENST00000485792 ATG2BQ96BY7 2078 aa6.21□□□□□ -1.42
CUX1-208ENST00000485792 WDR87Q6ZQQ6 2873 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 GOLGA8IPA6NC78 632 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 GOLGA8JA6NMD2 632 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 J3QL48 77 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 SYN3O14994 580 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 EXTL3O43909 919 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 RFPL2O75678 378 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 AVPP01185 164 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 CYP11A1P05108 521 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 KRT18P05783 430 aaKnown RBP6.2□□□□□ -1.42
CUX1-208ENST00000485792 SYKP43405 635 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 AFMP43652 599 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 GLUD2P49448 558 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 CASP4P49662 377 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 YARSP54577 528 aaKnown RBP6.2□□□□□ -1.42
CUX1-208ENST00000485792 LILRA4P59901 499 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 ITIH3Q06033 890 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 ENPEPQ07075 957 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 RAB33AQ14088 237 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 MYBPC2Q14324 1141 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 INTS6LQ5JSJ4 861 aaKnown RBP6.2□□□□□ -1.42
CUX1-208ENST00000485792 FAM26FQ5R3K3 315 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 LLGL2Q6P1M3 1020 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 C15orf39Q6ZRI6 1047 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 OSTM1Q86WC4 334 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 BRSK2Q8IWQ3 736 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 ADHFE1Q8IWW8 467 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 C1orf127Q8N9H9 656 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 ST13P5Q8NFI4 369 aaPredicted RBP6.2□□□□□ -1.42
CUX1-208ENST00000485792 OR10T2Q8NGX3 314 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 CASP10Q92851 521 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 MFSD14AQ96MC6 490 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 UCN2Q96RP3 112 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 PKMYT1Q99640 499 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 TCHPQ9BT92 498 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 TTPALQ9BTX7 342 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 MSTO1Q9BUK6 570 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 PLEKHA4Q9H4M7 779 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 POMKQ9H5K3 350 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 ENTPD7Q9NQZ7 604 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 TMEM30AQ9NV96 361 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 DZANK1Q9NVP4 752 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 RAPGEFL1Q9UHV5 662 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 CD207Q9UJ71 328 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 FBXW11Q9UKB1 542 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 UBQLN1Q9UMX0 589 aaKnown RBP6.2□□□□□ -1.42
CUX1-208ENST00000485792 EXOC7Q9UPT5 735 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 TRAF3IP3Q9Y228 551 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 USP15Q9Y4E8 981 aaPredicted RBP6.2□□□□□ -1.42
CUX1-208ENST00000485792 WASF2Q9Y6W5 498 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 MUC6Q6W4X9 2439 aa6.2□□□□□ -1.42
CUX1-208ENST00000485792 EML5Q05BV3 1969 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.19□□□□□ -1.42
CUX1-208ENST00000485792 ARHGEF37A1IGU5 675 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 WDR27A2RRH5 827 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 SHISA7A6NL88 538 aa6.19□□□□□ -1.42
CUX1-208ENST00000485792 PI4K2BG5E9Z4 385 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms