RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 LHX1P48742 406 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 CASP4P49662 377 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 CDR1P51861 262 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 ADAM9Q13443 819 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 MTMR3Q13615 1198 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 MGAT5BQ3V5L5 792 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 ZNF658Q5TYW1 1059 aaPredicted RBP13.44□□□□□ -0.26
PTCD1-205ENST00000485746 ISM2Q6H9L7 571 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 PDZD4Q76G19 769 aaPredicted RBP13.44□□□□□ -0.26
PTCD1-205ENST00000485746 ADGRF2Q8IZF7 708 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 TOP6BLQ8N6T0 577 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 ATAD1Q8NBU5 361 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 OR10T2Q8NGX3 314 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 SEPT5Q99719 369 aaPredicted RBP13.44□□□□□ -0.26
PTCD1-205ENST00000485746 ZCWPW1Q9H0M4 648 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 GDAP2Q9NXN4 497 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 DDX43Q9NXZ2 648 aaKnown RBP13.44□□□□□ -0.26
PTCD1-205ENST00000485746 L1RE1Q9UN81 338 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 TRAF3IP3Q9Y228 551 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 YIPF1Q9Y548 306 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 PCDHA5Q9Y5H7 936 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 MTMR11A4FU01 709 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 LRRIQ3A6PVS8 624 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 GPR37L1O60883 481 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 PAPLNO95428 1278 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 CST3P01034 146 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 MYL4P12829 197 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 PCSK1P29120 753 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 PSMC2P35998 433 aaKnown RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 TUFMP49411 452 aaKnown RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 UBE2HP62256 183 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 SMARCB1Q12824 385 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 VEPH1Q14D04 833 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 SCARA3Q6AZY7 606 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 CENPPQ6IPU0 288 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 FAM186BQ8IYM0 893 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 UBALD2Q8IYN6 164 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 ITFG1Q8TB96 612 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 PARD3BQ8TEW8 1205 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 C2orf15Q8WU43 125 aaKnown RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 ING5Q8WYH8 240 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 ZNF516Q92618 1163 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 LRFN3Q9BTN0 628 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 SNX25Q9H3E2 840 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 ASAH2Q9NR71 780 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 ABI2Q9NYB9 513 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 IGSF9Q9P2J2 1179 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 NXF1Q9UBU9 619 aaKnown RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 CDH7Q9ULB5 785 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
PTCD1-205ENST00000485746 ZFP37Q9Y6Q3 630 aaPredicted RBP13.43□□□□□ -0.26
PTCD1-205ENST00000485746 TMEM221A6NGB7 291 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 M0R296 226 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 CETN3O15182 167 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 N4BP1O75113 896 aaKnown RBP13.42□□□□□ -0.26
PTCD1-205ENST00000485746 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
PTCD1-205ENST00000485746 LAMP2P13473 410 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 ACAT1P24752 427 aaKnown RBP13.42□□□□□ -0.26
PTCD1-205ENST00000485746 ATICP31939 592 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 PRCPP42785 496 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 VAMP7P51809 220 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 TDGQ13569 410 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 NFE2Q16621 373 aaPredicted RBP13.42□□□□□ -0.26
PTCD1-205ENST00000485746 WDR72Q3MJ13 1102 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 TRIM67Q6ZTA4 783 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 DPH6Q7L8W6 267 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 OR6B3Q8NGW1 331 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 CXorf38Q8TB03 319 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 SPATA18Q8TC71 538 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 SPPL2BQ8TCT7 592 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 TMC2Q8TDI7 906 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 NXPE3Q969Y0 559 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 RTP3Q9BQQ7 232 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 ACBD6Q9BR61 282 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 MMRN2Q9H8L6 949 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 KCNK12Q9HB15 430 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 EPS15L1Q9UBC2 864 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 PLXNA3P51805 1871 aa13.42□□□□□ -0.26
PTCD1-205ENST00000485746 PRR33A8MZF0 331 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 MAPK13O15264 365 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 SOAT2O75908 522 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 PDGFRBP09619 1106 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 P4HA1P13674 534 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 GNL1P36915 607 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-205ENST00000485746 PIK3CAP42336 1068 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 MYL6P60660 151 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 SIGLEC14Q08ET2 396 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 NCOA4Q13772 614 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 NFIL3Q16649 462 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 SOWAHAQ2M3V2 549 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 ZNF699Q32M78 642 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 EDRF1Q3B7T1 1238 aa13.41□□□□□ -0.26
PTCD1-205ENST00000485746 TDRD10Q5VZ19 366 aaKnown RBP13.41□□□□□ -0.26
PTCD1-205ENST00000485746 INTS8Q75QN2 995 aaKnown RBP13.41□□□□□ -0.26
PTCD1-205ENST00000485746 MTSS1LQ765P7 747 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms