RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 GABRR2P28476 465 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 ABCD1P33897 745 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 SOX9P48436 509 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 PTPAQ15257 358 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 CRELD2Q6UXH1 353 aaPredicted RBP20.81■□□□□ 0.92
COL27A1-205ENST00000485397 FAM200AQ8TCP9 573 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 CSGALNACT1Q8TDX6 532 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 SEPT5Q99719 369 aaPredicted RBP20.81■□□□□ 0.92
COL27A1-205ENST00000485397 PYM1Q9BRP8 204 aaKnown RBP20.81■□□□□ 0.92
COL27A1-205ENST00000485397 ZCWPW1Q9H0M4 648 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 DPP3Q9NY33 737 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 ZNF292O60281 2723 aa20.81■□□□□ 0.92
COL27A1-205ENST00000485397 SCN1AP35498 2009 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 CHADO15335 359 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 CHRNB1P11230 501 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 TDGF1P13385 188 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 ADSSP30520 456 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 TAF6P49848 677 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 FCHO2Q0JRZ9 810 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 MGAT5BQ3V5L5 792 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 GPR158Q5T848 1215 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 WSCD1Q658N2 575 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 LRRTM3Q86VH5 581 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 EFCAB13Q8IY85 973 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 TTC8Q8TAM2 541 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 POMGNT1Q8WZA1 660 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 CLIC6Q96NY7 704 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 EPC1Q9H2F5 836 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 HSFX1Q9UBD0 423 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 FBXO2Q9UK22 296 aaPredicted RBP20.8■□□□□ 0.92
COL27A1-205ENST00000485397 DSEQ9UL01 958 aa20.8■□□□□ 0.92
COL27A1-205ENST00000485397 SMG5Q9UPR3 1016 aaKnown RBP20.8■□□□□ 0.92
COL27A1-205ENST00000485397 ANK1P16157 1881 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 MYMKA6NI61 221 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 SLC38A8A6NNN8 435 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 PPP1R37O75864 691 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 ATF6P18850 670 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 TUFMP49411 452 aaKnown RBP20.79■□□□□ 0.92
COL27A1-205ENST00000485397 CYP4F8P98187 520 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 KCNA1Q09470 495 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 CUL4AQ13619 759 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 GAS6Q14393 721 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 FAM173BQ6P4H8 233 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 MAMSTRQ6ZN01 415 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 ITIH5Q86UX2 942 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 METTL23Q86XA0 190 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 ZFYVE19Q96K21 471 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 STRA6Q9BX79 667 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 TBC1D7Q9P0N9 293 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 CCDC39Q9UFE4 941 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 DCHS1Q96JQ0 3298 aa20.79■□□□□ 0.92
COL27A1-205ENST00000485397 TSC2P49815 1807 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 TULP1O00294 542 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-205ENST00000485397 DPYSL4O14531 572 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 KPNA1P52294 538 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-205ENST00000485397 MLLT6P55198 1093 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-205ENST00000485397 WNT7BP56706 349 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 SATB1Q01826 763 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 ARHGAP15Q53QZ3 475 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 RRAGBQ5VZM2 374 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 DGLUCYQ7Z3D6 616 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 THEM5Q8N1Q8 247 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 ZSWIM2Q8NEG5 633 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 GIPC2Q8TF65 315 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 HVCN1Q96D96 273 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 DNAJC19Q96DA6 116 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 FAM126AQ9BYI3 521 aaPredicted RBP20.78■□□□□ 0.92
COL27A1-205ENST00000485397 MRPL44Q9H9J2 332 aaKnown RBP20.78■□□□□ 0.92
COL27A1-205ENST00000485397 IL21Q9HBE4 155 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 RBM12Q9NTZ6 932 aaKnown RBP20.78■□□□□ 0.92
COL27A1-205ENST00000485397 STK17AQ9UEE5 414 aa20.78■□□□□ 0.92
COL27A1-205ENST00000485397 SRPRBQ9Y5M8 271 aaKnown RBP20.78■□□□□ 0.92
COL27A1-205ENST00000485397 PRAMEF12O95522 483 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 FGF19O95750 216 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 CCR3P51677 355 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 POU5F1Q01860 360 aaKnown RBP20.77■□□□□ 0.92
COL27A1-205ENST00000485397 CEBPZQ03701 1054 aaKnown RBP20.77■□□□□ 0.92
COL27A1-205ENST00000485397 PUM1Q14671 1186 aaKnown RBP eCLIP20.77■□□□□ 0.92
COL27A1-205ENST00000485397 VEPH1Q14D04 833 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 POSTNQ15063 836 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 WDR44Q5JSH3 913 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 TXNDC11Q6PKC3 985 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 IER2Q9BTL4 223 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 TASP1Q9H6P5 420 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 C8orf33Q9H7E9 229 aaPredicted RBP20.77■□□□□ 0.92
COL27A1-205ENST00000485397 GTSE1Q9NYZ3 720 aa20.77■□□□□ 0.92
COL27A1-205ENST00000485397 MED19A0JLT2 244 aaPredicted RBP20.76■□□□□ 0.91
COL27A1-205ENST00000485397 KPNA7A9QM74 516 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 IL18RAPO95256 599 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 HAPLN1P10915 354 aaPredicted RBP20.76■□□□□ 0.91
COL27A1-205ENST00000485397 RESTQ13127 1097 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 RSPO4Q2I0M5 234 aaPredicted RBP20.76■□□□□ 0.91
COL27A1-205ENST00000485397 ARHGAP29Q52LW3 1261 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 SV2BQ7L1I2 683 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 SAAL1Q96ER3 474 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 MSANTD3Q96H12 275 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 FAM213AQ9BRX8 229 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 SMG9Q9H0W8 520 aaKnown RBP20.76■□□□□ 0.91
COL27A1-205ENST00000485397 TMLHEQ9NVH6 421 aa20.76■□□□□ 0.91
COL27A1-205ENST00000485397 ABI2Q9NYB9 513 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms