RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 STOX1Q6ZVD7 989 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 CHST3Q7LGC8 479 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 ANKRD18AQ8IVF6 992 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 VGLL2Q8N8G2 317 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 FERMT2Q96AC1 680 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 SLC7A6OSQ96CW6 309 aaPredicted RBP4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 BORCS6Q96GS4 357 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 ALDH8A1Q9H2A2 487 aaPredicted RBP4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 USP40Q9NVE5 1235 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 NARFQ9UHQ1 456 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 TRPC5Q9UL62 973 aaPredicted RBP4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 DOT1LQ8TEK3 1739 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 MAST3O60307 1309 aa4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 WDR33Q9C0J8 1336 aaKnown RBP4.94□□□□□ -1.62
TM9SF3-205ENST00000485093 RFX7Q2KHR2 1363 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 NUP98P52948 1817 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 hCG_2014768A0A024R1R8 64 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 VPS37CA5D8V6 355 aaPredicted RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 E7EWF7 191 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 STX6O43752 255 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 NRP2O60462 931 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 FGAP02671 866 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 MTHFD2P13995 350 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 CR2P20023 1033 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 SYT1P21579 422 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 CTSSP25774 331 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 RFC4P35249 363 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 ADD2P35612 726 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 IARSP41252 1262 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 MEOX1P50221 254 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 HAND2P61296 217 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 CCT2P78371 535 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 ATP2C1P98194 919 aaPredicted RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 SRSF2Q01130 221 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 ST3GAL1Q11201 340 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 ODF1Q14990 250 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 UBE3CQ15386 1083 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 IMMTQ16891 758 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 SLC10A5Q5PT55 438 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 TCTN3Q6NUS6 607 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 NBPF5PQ86XG9 351 aaPredicted RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 TICAM2Q86XR7 235 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 RTKN2Q8IZC4 609 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 MSL3Q8N5Y2 521 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 SPATA5Q8NB90 893 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 TGFBRAP1Q8WUH2 860 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 JADE3Q92613 823 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 FATE1Q969F0 183 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 CDC5LQ99459 802 aaKnown RBP4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 NYXQ9GZU5 481 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 IFT122Q9HBG6 1241 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 DPP7Q9UHL4 492 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 CTNNA3Q9UI47 895 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 USP18Q9UMW8 372 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 OAZ3Q9UMX2 235 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 SLC30A1Q9Y6M5 507 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 ZNF532Q9HCE3 1301 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 WNK3Q9BYP7 1800 aa4.93□□□□□ -1.62
TM9SF3-205ENST00000485093 RPAP1Q9BWH6 1393 aaPredicted RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 NWD2Q9ULI1 1742 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 RIC1Q4ADV7 1423 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 ZNF213O14771 459 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 GPAA1O43292 621 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 SLC26A4O43511 780 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 FOXS1O43638 330 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 CFBP00751 764 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 JUNP05412 331 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 HMGB1P09429 215 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 LTA4HP09960 611 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 GYG1P46976 350 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 RRADP55042 308 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 WNT3AP56704 352 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 RAC3P60763 192 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 RPS8P62241 208 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 PPARAQ07869 468 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 ITKQ08881 620 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 ACAP1Q15027 740 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 PCBP2Q15366 365 aaKnown RBP eCLIP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 SF3B3Q15393 1217 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 KLHL40Q2TBA0 621 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 TOR2AQ5JU69 321 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 CAVIN1Q6NZI2 390 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 BTNL9Q6UXG8 535 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 ABHD15Q6UXT9 468 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 Q6ZVL8 140 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 MAGEB6Q8N7X4 407 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 SNX33Q8WV41 574 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 AUTS2Q8WXX7 1259 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 CELF1Q92879 486 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 PAWRQ96IZ0 340 aaKnown RBP4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 C1QTNF3Q9BXJ4 246 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 NELFAQ9H3P2 528 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 TUBD1Q9UJT1 453 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 EDARQ9UNE0 448 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 CNPY2Q9Y2B0 182 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 NR2E1Q9Y466 385 aa4.92□□□□□ -1.62
TM9SF3-205ENST00000485093 GPR45Q9Y5Y3 372 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms