RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 NDUFV1P49821 464 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 POLR2FP61218 127 aaKnown RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 POU5F1BQ06416 359 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 SOX4Q06945 474 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 KCNMA1Q12791 1236 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 STRN3Q13033 797 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 MTF1Q14872 753 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 FAM187BQ17R55 369 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 PDXDC1Q6P996 788 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 TMC7Q7Z402 723 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 VPS52Q8N1B4 723 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 TMEM161BQ8NDZ6 487 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 URGCPQ8TCY9 931 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 ATXN2LQ8WWM7 1075 aaKnown RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 PABPC5Q96DU9 382 aaKnown RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 BICD1Q96G01 975 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 TMEM169Q96HH4 297 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 IGSF21Q96ID5 467 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 FAM84AQ96KN4 292 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 UHRF1Q96T88 793 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 EIF3CQ99613 913 aaKnown RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 CHP1Q99653 195 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 ACO2Q99798 780 aaKnown RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 NTPCRQ9BSD7 190 aaKnown RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 CRACR2AQ9BSW2 395 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 REPIN1Q9BWE0 567 aaKnown RBP7.46□□□□□ -1.22
BRCA1-216ENST00000484087 LMAN2LQ9H0V9 348 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 ZBP1Q9H171 429 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 HAUS4Q9H6D7 363 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 AAASQ9NRG9 546 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 DMAC2Q9NW81 257 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 MYO6Q9UM54 1294 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 TBX20Q9UMR3 447 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 TSC2P49815 1807 aa7.46□□□□□ -1.22
BRCA1-216ENST00000484087 SSU72P8A0A1W2PR75 194 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 C2orf71A6NGG8 1288 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 I3L4J1 428 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 KIAA0391O15091 583 aaKnown RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 P4HA2O15460 535 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 URI1O94763 535 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 SLU7O95391 586 aaKnown RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 SERPING1P05155 500 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 CCDC172P0C7W6 258 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 SKIP12755 728 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 EPCAMP16422 314 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 RPL17P18621 184 aaKnown RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 RFX1P22670 979 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 ALDH7A1P49419 539 aaKnown RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 CASP4P49662 377 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 GUCY2FP51841 1108 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 PLCB3Q01970 1234 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 DSC1Q08554 894 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 KIF5AQ12840 1032 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 BFSP1Q12934 665 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 TUBB2AQ13885 445 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 RAPGEF1Q13905 1077 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 NAB2Q15742 525 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 ASIC2Q16515 512 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 DUSP6Q16828 381 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 CTC1Q2NKJ3 1217 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 TDRD12Q587J7 1177 aaKnown RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 PTCRAQ6ISU1 281 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 SLC39A4Q6P5W5 647 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 WDR59Q6PJI9 974 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 VPS36Q86VN1 386 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 MAP4K3Q8IVH8 894 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 C12orf76Q8N812 135 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 C3orf58Q8NDZ4 430 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 ACRBPQ8NEB7 543 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 ZSWIM2Q8NEG5 633 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 ZDHHC16Q969W1 377 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 SLC35C1Q96A29 364 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 C18orf25Q96B23 403 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 ZMAT2Q96NC0 199 aaKnown RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 FAM193BQ96PV7 902 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 RPS6KC1Q96S38 1066 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 TUBB2BQ9BVA1 445 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 TLE6Q9H808 572 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 NLRC4Q9NPP4 1024 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 GCNT4Q9P109 453 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 FBXL5Q9UKA1 691 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 BZW2Q9Y6E2 419 aaKnown RBP7.45□□□□□ -1.22
BRCA1-216ENST00000484087 DENND4AQ7Z401 1863 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 DOCK6Q96HP0 2047 aa7.45□□□□□ -1.22
BRCA1-216ENST00000484087 ANKRD63C9JTQ0 380 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 HNRNPDLO14979 420 aaKnown RBP7.44□□□□□ -1.22
BRCA1-216ENST00000484087 MAP3K7O43318 606 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 CXCL8P10145 99 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 GARTP22102 1010 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 PON1P27169 355 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 PPM1AP35813 382 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 MATR3P43243 847 aaKnown RBP eCLIP7.44□□□□□ -1.22
BRCA1-216ENST00000484087 FMO5P49326 533 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 LIG4P49917 911 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 VAMP7P51809 220 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 CDR1P51861 262 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 MYL7Q01449 175 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 NCBP1Q09161 790 aaKnown RBP7.44□□□□□ -1.22
BRCA1-216ENST00000484087 KLHL30Q0D2K2 578 aa7.44□□□□□ -1.22
BRCA1-216ENST00000484087 ADAM15Q13444 863 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms