RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 NOLC1Q14978 699 aaKnown RBP eCLIP14.02□□□□□ -0.17
UBR4-213ENST00000483922 ENOX2Q16206 610 aaKnown RBP14.02□□□□□ -0.17
UBR4-213ENST00000483922 AASDHQ4L235 1098 aaPredicted RBP14.02□□□□□ -0.17
UBR4-213ENST00000483922 TMEM196Q5HYL7 178 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 HAUS3Q68CZ6 603 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 TRIM68Q6AZZ1 485 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 IL31Q6EBC2 164 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 TCEAL6Q6IPX3 200 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 C1orf228Q6PIY5 440 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 LRRTM3Q86VH5 581 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 SYNPOQ8N3V7 929 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 FBXO18Q8NFZ0 1043 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 BPIFB1Q8TDL5 484 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 SPIRE2Q8WWL2 714 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 EZH1Q92800 747 aaPredicted RBP14.02□□□□□ -0.17
UBR4-213ENST00000483922 TCEAL3Q969E4 200 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 PNMA5Q96PV4 448 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 FAM83CQ9BQN1 747 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 PLEKHA5Q9HAU0 1116 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 WASF3Q9UPY6 502 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 CCL26Q9Y258 94 aa14.02□□□□□ -0.17
UBR4-213ENST00000483922 ANTXRLA6NF34 631 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 OR6C75A6NL08 312 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 GIPC1O14908 333 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 DCLK1O15075 740 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 RPP40O75818 363 aaKnown RBP14.01□□□□□ -0.17
UBR4-213ENST00000483922 HOXB3P14651 431 aaPredicted RBP14.01□□□□□ -0.17
UBR4-213ENST00000483922 CYP3A5P20815 502 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 NEK4P51957 841 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 PLD1Q13393 1074 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 MYBPC2Q14324 1141 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 ARSHQ5FYA8 562 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 OVOS1Q6IE37 1185 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 ZPBP2Q6X784 338 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 CACNA2D4Q7Z3S7 1137 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 DDX1Q92499 740 aaKnown RBP14.01□□□□□ -0.17
UBR4-213ENST00000483922 KIF12Q96FN5 646 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 LOXL4Q96JB6 756 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 ZC3H10Q96K80 434 aaKnown RBP14.01□□□□□ -0.17
UBR4-213ENST00000483922 SENP8Q96LD8 212 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 TASP1Q9H6P5 420 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 ASB3Q9Y575 518 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 LAMA5O15230 3695 aa14.01□□□□□ -0.17
UBR4-213ENST00000483922 NUP210Q8TEM1 1887 aaPredicted RBP14.01□□□□□ -0.17
UBR4-213ENST00000483922 C1QTNF9BB2RNN3 333 aa14□□□□□ -0.17
UBR4-213ENST00000483922 CLDN3O15551 220 aa14□□□□□ -0.17
UBR4-213ENST00000483922 FOXD2O60548 495 aaPredicted RBP14□□□□□ -0.17
UBR4-213ENST00000483922 TOP3BO95985 862 aaKnown RBP14□□□□□ -0.17
UBR4-213ENST00000483922 EGFP01133 1207 aa14□□□□□ -0.17
UBR4-213ENST00000483922 CLTAP09496 248 aa14□□□□□ -0.17
UBR4-213ENST00000483922 C1QTNF9P0C862 333 aa14□□□□□ -0.17
UBR4-213ENST00000483922 PLS3P13797 630 aa14□□□□□ -0.17
UBR4-213ENST00000483922 TYMPP19971 482 aa14□□□□□ -0.17
UBR4-213ENST00000483922 GUCY2CP25092 1073 aa14□□□□□ -0.17
UBR4-213ENST00000483922 GALK1P51570 392 aa14□□□□□ -0.17
UBR4-213ENST00000483922 SAFBQ15424 915 aaKnown RBP eCLIP14□□□□□ -0.17
UBR4-213ENST00000483922 ITPRIPL2Q3MIP1 535 aa14□□□□□ -0.17
UBR4-213ENST00000483922 PLK5Q496M5 336 aa14□□□□□ -0.17
UBR4-213ENST00000483922 DSTYKQ6XUX3 929 aa14□□□□□ -0.17
UBR4-213ENST00000483922 GIPC2Q8TF65 315 aa14□□□□□ -0.17
UBR4-213ENST00000483922 LRRC15Q8TF66 581 aa14□□□□□ -0.17
UBR4-213ENST00000483922 C8orf76Q96K31 380 aa14□□□□□ -0.17
UBR4-213ENST00000483922 DRC1Q96MC2 740 aa14□□□□□ -0.17
UBR4-213ENST00000483922 TMEM121BQ9BXQ6 578 aaPredicted RBP14□□□□□ -0.17
UBR4-213ENST00000483922 OXCT2Q9BYC2 517 aaPredicted RBP14□□□□□ -0.17
UBR4-213ENST00000483922 DUSP15Q9H1R2 295 aaPredicted RBP14□□□□□ -0.17
UBR4-213ENST00000483922 C17orf75Q9HAS0 396 aa14□□□□□ -0.17
UBR4-213ENST00000483922 UBQLN1Q9UMX0 589 aaKnown RBP14□□□□□ -0.17
UBR4-213ENST00000483922 BAHCC1Q9P281 2608 aa14□□□□□ -0.17
UBR4-213ENST00000483922 CCDC163A0A0D9SF12 145 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 PIRO00625 290 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 DPYSL4O14531 572 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
UBR4-213ENST00000483922 F11P03951 625 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 ARSAP15289 507 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 HMGA1P17096 107 aaKnown RBP13.99□□□□□ -0.17
UBR4-213ENST00000483922 U2AF2P26368 475 aaKnown RBP eCLIP13.99□□□□□ -0.175e-8■■■■■ 34.6
UBR4-213ENST00000483922 NMT1P30419 496 aaKnown RBP13.99□□□□□ -0.17
UBR4-213ENST00000483922 RUNX3Q13761 415 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 SPATA1Q5VX52 437 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 SCARA3Q6AZY7 606 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 SLC39A4Q6P5W5 647 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 USP37Q86T82 979 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 CCDC83Q8IWF9 413 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 CMTM8Q8IZV2 173 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
UBR4-213ENST00000483922 C12orf50Q8NA57 414 aaPredicted RBP13.99□□□□□ -0.17
UBR4-213ENST00000483922 STKLD1Q8NE28 680 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 USP13Q92995 863 aaPredicted RBP13.99□□□□□ -0.17
UBR4-213ENST00000483922 PLIN2Q99541 437 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 ZCWPW1Q9H0M4 648 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 EBF3Q9H4W6 596 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 HSFX1Q9UBD0 423 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 ZFYVE26Q68DK2 2539 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 ATG2BQ96BY7 2078 aa13.99□□□□□ -0.17
UBR4-213ENST00000483922 NBEAQ8NFP9 2946 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 ANO9A1A5B4 782 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 RNF40O75150 1001 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 SEC24BO95487 1268 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 CYP11A1P05108 521 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms