RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 P4HA1P13674 534 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 USP8P40818 1118 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 PAFAH1B1P43034 410 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 CYP27A1Q02318 531 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 GRIK3Q13003 919 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 GLE1Q53GS7 698 aaKnown RBP18.33■□□□□ 0.52
MRPL28-210ENST00000483764 CLLU1OSQ5K130 101 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 RPUSD2Q8IZ73 545 aaKnown RBP18.33■□□□□ 0.52
MRPL28-210ENST00000483764 MMGT1Q8N4V1 131 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 FUT8Q9BYC5 575 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
MRPL28-210ENST00000483764 PRKAG2Q9UGJ0 569 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 LRFN2Q9ULH4 789 aa18.33■□□□□ 0.52
MRPL28-210ENST00000483764 MACROD2A1Z1Q3 448 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 RCCD1A6NED2 376 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 EVI5O60447 810 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 PLEKP08567 350 aaPredicted RBP18.32■□□□□ 0.52
MRPL28-210ENST00000483764 FGFR1P11362 822 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 ACO1P21399 889 aaKnown RBP18.32■□□□□ 0.52
MRPL28-210ENST00000483764 PNPLA4P41247 253 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 ASPAP45381 313 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 BEND6Q5SZJ8 279 aaPredicted RBP18.32■□□□□ 0.52
MRPL28-210ENST00000483764 CRIPAKQ8N1N5 446 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 ZNF560Q96MR9 790 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 POLIQ9UNA4 740 aa18.32■□□□□ 0.52
MRPL28-210ENST00000483764 SCN5AQ14524 2016 aa18.31■□□□□ 0.52
MRPL28-210ENST00000483764 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
MRPL28-210ENST00000483764 TNNC1P63316 161 aa18.31■□□□□ 0.52
MRPL28-210ENST00000483764 NOMO2Q5JPE7 1267 aa18.31■□□□□ 0.52
MRPL28-210ENST00000483764 URGCPQ8TCY9 931 aa18.31■□□□□ 0.52
MRPL28-210ENST00000483764 BCO2Q9BYV7 579 aa18.31■□□□□ 0.52
MRPL28-210ENST00000483764 KANSL3Q9P2N6 904 aa18.31■□□□□ 0.52
MRPL28-210ENST00000483764 TRIP11Q15643 1979 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 ABHD14A-ACY1A0A1B0GW23 586 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 GRID2IPA4D2P6 1211 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 CYP26A1O43174 497 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 HOXA2O43364 376 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 PFKMP08237 780 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 WEE2P0C1S8 567 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 KRT5P13647 590 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 PLA2G4AP47712 749 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 YWHAEP62258 255 aaKnown RBP18.3■□□□□ 0.52
MRPL28-210ENST00000483764 TUSC3Q13454 348 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 SMYD5Q6GMV2 418 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 SCARA5Q6ZMJ2 495 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.3■□□□□ 0.524e-8■■■■□ 26.4
MRPL28-210ENST00000483764 NPAS4Q8IUM7 802 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 ABI1Q8IZP0 508 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 UBR7Q8N806 425 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 CYP3A43Q9HB55 503 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 CISHQ9NSE2 258 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 L1RE1Q9UN81 338 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 CNTN6Q9UQ52 1028 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 PCDHB4Q9Y5E5 795 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 TET1Q8NFU7 2136 aa18.3■□□□□ 0.52
MRPL28-210ENST00000483764 A0A0A6YYK5 440 aaPredicted RBP18.29■□□□□ 0.52
MRPL28-210ENST00000483764 KPNA7A9QM74 516 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 TAF6P49848 677 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 CLCNKBP51801 687 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 LILRA4P59901 499 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 PTK2Q05397 1052 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 TERF2Q15554 542 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 SV2CQ496J9 727 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 DDX27Q96GQ7 796 aaKnown RBP18.29■□□□□ 0.52
MRPL28-210ENST00000483764 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 PCDHGC5Q9Y5F6 944 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 SNX9Q9Y5X1 595 aa18.29■□□□□ 0.52
MRPL28-210ENST00000483764 CASTOR2A6NHX0 329 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 PODXLO00592 558 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 ENC1O14682 589 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 SPTLC1O15269 473 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 CD58P19256 250 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 CDH8P55286 799 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 SMC1AQ14683 1233 aaKnown RBP18.28■□□□□ 0.52
MRPL28-210ENST00000483764 UPP1Q16831 310 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 CCDC181Q5TID7 509 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 TMEM270Q6UE05 265 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 ZNF571Q7Z3V5 609 aaPredicted RBP18.28■□□□□ 0.52
MRPL28-210ENST00000483764 C7orf61Q8IZ16 206 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 ABHD8Q96I13 439 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 UROC1Q96N76 676 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 OSBPL9Q96SU4 736 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 HTATIP2Q9BUP3 242 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 SDCBP2Q9H190 292 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 SMYD3Q9H7B4 428 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 IL23AQ9NPF7 189 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 MED4Q9NPJ6 270 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 TBC1D13Q9NVG8 400 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 GDAP2Q9NXN4 497 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 CACNG4Q9UBN1 327 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 MKI67P46013 3256 aaKnown RBP18.28■□□□□ 0.52
MRPL28-210ENST00000483764 PDCD11Q14690 1871 aaKnown RBP18.28■□□□□ 0.52
MRPL28-210ENST00000483764 EFCAB14O75071 495 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 ACRP10323 421 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 RAP1GAPP47736 663 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 BPIFB4P59827 614 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 GFPT1Q06210 699 aaPredicted RBP18.28■□□□□ 0.52
MRPL28-210ENST00000483764 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 SLC47A2Q86VL8 602 aa18.28■□□□□ 0.52
MRPL28-210ENST00000483764 CREG2Q8IUH2 290 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms