RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ECHS1P30084 290 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 GUCY2FP51841 1108 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 CRYBB1P53674 252 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 GSCP56915 257 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 ZNF200P98182 395 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 PTPN11Q06124 597 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 GABPB1Q06547 395 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 PPP1R15BQ5SWA1 713 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 PHLDB2Q86SQ0 1253 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 ZDHHC14Q8IZN3 488 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 PRELID2Q8N945 189 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 DDX27Q96GQ7 796 aaKnown RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 TMEM176AQ96HP8 235 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 GDAP1L1Q96MZ0 367 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 ZMAT2Q96NC0 199 aaKnown RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 TWNKQ96RR1 684 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 ELOVL4Q9GZR5 314 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 UPF3AQ9H1J1 476 aaKnown RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 CNTN3Q9P232 1028 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 FAM187AA6NFU0 413 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 FSCN2O14926 492 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 TLR3O15455 904 aaKnown RBP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 TTI1O43156 1089 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 PSTPIP1O43586 416 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 PHF2O75151 1096 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 CHRNA3P32297 505 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 YARSP54577 528 aaKnown RBP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 TAP1Q03518 808 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 DHX34Q14147 1143 aaKnown RBP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 SIX1Q15475 284 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 TRADDQ15628 312 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 MFSD14CQ5VZR4 134 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 TAF2Q6P1X5 1199 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 DENND1BQ6P3S1 775 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 MREGQ8N565 214 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 C7orf31Q8N865 590 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 C12orf50Q8NA57 414 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 IFT81Q8WYA0 676 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 TSPAN18Q96SJ8 248 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 PLEKHA4Q9H4M7 779 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 MED4Q9NPJ6 270 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 PCYOX1Q9UHG3 505 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 IP6K2Q9UHH9 426 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 ABT1Q9ULW3 272 aaKnown RBP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 BARX2Q9UMQ3 279 aaPredicted RBP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.05□□□□□ -0.16
CPNE1-225ENST00000483495 RALGAPA2Q2PPJ7 1873 aa14.05□□□□□ -0.16
CPNE1-225ENST00000483495 MYADML2A6NDP7 307 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 ALDH1A1P00352 501 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 CD19P15391 556 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 PSMC4P43686 418 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 XKR4Q5GH76 650 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 ADAT2Q7Z6V5 191 aaKnown RBP14.04□□□□□ -0.16
CPNE1-225ENST00000483495 ERICH1Q86X53 443 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 LRRC52Q8N7C0 313 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 C3orf20Q8ND61 904 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 TRIB2Q92519 343 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 MTG1Q9BT17 334 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-225ENST00000483495 CXCL16Q9H2A7 254 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 HMGXB4Q9UGU5 601 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 STRIP2Q9ULQ0 834 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 C6orf222P0C671 652 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-225ENST00000483495 FAM153BP0C7A2 387 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 VDRP11473 427 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 RPL7AP62424 266 aaKnown RBP14.04□□□□□ -0.16
CPNE1-225ENST00000483495 DR1Q01658 176 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 MYO1EQ12965 1108 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 CNGA2Q16280 664 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 FAM153CQ494X1 144 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 UBXN11Q5T124 520 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 DNAJC24Q6P3W2 148 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 RHOT1Q8IXI2 618 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 BEST2Q8NFU1 509 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 RUNDC3BQ96NL0 473 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 CELF4Q9BZC1 486 aaKnown RBP14.04□□□□□ -0.16
CPNE1-225ENST00000483495 ARHGAP39Q9C0H5 1083 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 RAB17Q9H0T7 212 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 NXF3Q9H4D5 531 aaKnown RBP14.04□□□□□ -0.16
CPNE1-225ENST00000483495 FAM153AQ9UHL3 310 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 MTUS1Q9ULD2 1270 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 KIAA1257Q9ULG3 409 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 GABRQQ9UN88 632 aa14.04□□□□□ -0.16
CPNE1-225ENST00000483495 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.04□□□□□ -0.16
CPNE1-225ENST00000483495 UTP11Q9Y3A2 253 aaKnown RBP14.04□□□□□ -0.16
CPNE1-225ENST00000483495 CITO14578 2027 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 TCRBV7S2A1N4TA0A589 114 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 DCAF8L1A6NGE4 600 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 RECQL4O94761 1208 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 HMGCRP04035 888 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 RARAP10276 462 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 PTGIRP43119 386 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 PTPN20Q4JDL3 420 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 KATNAL2Q8IYT4 538 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 NIPA2Q8N8Q9 360 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 FAM71BQ8TC56 605 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 TRIM6Q9C030 488 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-225ENST00000483495 FAM114A2Q9NRY5 505 aa14.03□□□□□ -0.16
CPNE1-225ENST00000483495 CYTH4Q9UIA0 394 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms