RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 GPD1LQ8N335 351 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 EMC1Q8N766 993 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 FBXO36Q8NEA4 188 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 HELQQ8TDG4 1101 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 SCG3Q8WXD2 468 aaKnown RBP13.39□□□□□ -0.27
VPS52-218ENST00000482399 PAFAH2Q99487 392 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 HEY1Q9Y5J3 304 aa13.39□□□□□ -0.27
VPS52-218ENST00000482399 TOM1L1O75674 476 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 MMP10P09238 476 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 MYL2P10916 166 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 ARL4CP56559 192 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 C1orf146Q5VVC0 180 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 ARID3BQ8IVW6 561 aaPredicted RBP13.38□□□□□ -0.27
VPS52-218ENST00000482399 CCDC110Q8TBZ0 833 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 UTP4Q969X6 686 aaKnown RBP13.38□□□□□ -0.27
VPS52-218ENST00000482399 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 SH3GL3Q99963 347 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 TMEM109Q9BVC6 243 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 SMG5Q9UPR3 1016 aaKnown RBP13.38□□□□□ -0.27
VPS52-218ENST00000482399 MYH11P35749 1972 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 MROH7Q68CQ1 1323 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 CCDC22O60826 627 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 GTF2H1P32780 548 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 DSG3P32926 999 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 DARS2Q6PI48 645 aaKnown RBP13.38□□□□□ -0.27
VPS52-218ENST00000482399 KCTD6Q8NC69 237 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 PSPC1Q8WXF1 523 aaKnown RBP13.38□□□□□ -0.27
VPS52-218ENST00000482399 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 PPP1R16BQ96T49 567 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 TMEM39BQ9GZU3 492 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 CCDC134Q9H6E4 229 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 PIDD1Q9HB75 910 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 ARL8BQ9NVJ2 186 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 RBAKQ9NYW8 714 aaPredicted RBP13.38□□□□□ -0.27
VPS52-218ENST00000482399 ITGB4P16144 1822 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 hCG_2014768A0A024R1R8 64 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 EDF1O60869 148 aaKnown RBP13.38□□□□□ -0.27
VPS52-218ENST00000482399 PEX11AO75192 247 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 SMNDC1O75940 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
VPS52-218ENST00000482399 TPBGLP0DKB5 382 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 ADSSP30520 456 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 SERPINB6P35237 376 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 SLC1A1P43005 524 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 BLMHQ13867 455 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 PPP2R5DQ14738 602 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 MAPK6Q16659 721 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 AGR3Q8TD06 166 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 GMCL1Q96IK5 515 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 FAM81BQ96LP2 452 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 ACAP3Q96P50 834 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 SYT11Q9BT88 431 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 MSTO1Q9BUK6 570 aa13.38□□□□□ -0.27
VPS52-218ENST00000482399 COPEO14579 308 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 GM2AP17900 193 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 PTPN4P29074 926 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 GALNTL6Q49A17 601 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 TXNRD3NBQ6F5E7 133 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 MAB21L3Q8N8X9 362 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 ACTL9Q8TC94 416 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 ZNF483Q8TF39 744 aaPredicted RBP13.37□□□□□ -0.27
VPS52-218ENST00000482399 CD101Q93033 1021 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 CLPTM1LQ96KA5 538 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 TARS2Q9BW92 718 aaKnown RBP13.37□□□□□ -0.27
VPS52-218ENST00000482399 TMEM120AQ9BXJ8 343 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 NMRK1Q9NWW6 199 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 SLC9A2Q9UBY0 812 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.37□□□□□ -0.27
VPS52-218ENST00000482399 LRP5O75197 1615 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 K7ERI5 159 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 P4HA2O15460 535 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 GRAP2O75791 330 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 ALDH1B1P30837 517 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 TUBP50607 506 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 GEMIN4P57678 1058 aaKnown RBP13.37□□□□□ -0.27
VPS52-218ENST00000482399 PSMC5P62195 406 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 NR1H3Q13133 447 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 ALCAMQ13740 583 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 BMPR2Q13873 1038 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 CYP1B1Q16678 543 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 TKFCQ3LXA3 575 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 C1orf220Q5T0J3 134 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 C1orf228Q6PIY5 440 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 SYDE1Q6ZW31 735 aaPredicted RBP13.37□□□□□ -0.27
VPS52-218ENST00000482399 EEPD1Q7L9B9 569 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 ATP11CQ8NB49 1132 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 SMC1BQ8NDV3 1235 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 FEZF2Q8TBJ5 459 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
VPS52-218ENST00000482399 RBM41Q96IZ5 413 aaKnown RBP13.37□□□□□ -0.27
VPS52-218ENST00000482399 FGD4Q96M96 766 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 TTC25Q96NG3 672 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 DCLRE1BQ9H816 532 aa13.37□□□□□ -0.27
VPS52-218ENST00000482399 XPO7Q9UIA9 1087 aaKnown RBP13.37□□□□□ -0.27
VPS52-218ENST00000482399 IRS2Q9Y4H2 1338 aa13.36□□□□□ -0.27
VPS52-218ENST00000482399 FAM237BA0A1B0GVD1 139 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms