RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 BARX1Q9HBU1 254 aaPredicted RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 FANCFQ9NPI8 374 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 UNC13AQ9UPW8 1703 aa4.62□□□□□ -1.67
VPS41-212ENST00000482217 SOS1Q07889 1333 aaPredicted RBP4.62□□□□□ -1.67
VPS41-212ENST00000482217 A0A0A6YYK5 440 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 H7C0S8 307 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 SKAP2O75563 359 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 BAG2O95816 211 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 CELA3BP08861 270 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 DHRS4L1P0CG22 281 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 OSMP13725 252 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 DESP17661 470 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 KRT9P35527 623 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 ACTN2P35609 894 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 KCNQ1P51787 676 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 LIMK1P53667 647 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 ATXN1P54253 815 aaKnown RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 NR1H2P55055 460 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 SATB1Q01826 763 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 MEF2AQ02078 507 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 DMTNQ08495 405 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 TMED1Q13445 227 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 PSMD6Q15008 389 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 ZNF827Q17R98 1081 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 WSCD2Q2TBF2 565 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 TTC31Q49AM3 519 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 SETMARQ53H47 684 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 HSP90B2PQ58FF3 399 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 ZNF362Q5T0B9 420 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 CFAP58Q5T655 872 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 KLHDC10Q6PID8 442 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 GAREM2Q75VX8 874 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 COL23A1Q86Y22 540 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 TXNDC5Q8NBS9 432 aaKnown RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 ADAMTS17Q8TE56 1095 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 UCMAQ8WVF2 138 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 USP13Q92995 863 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 LPPQ93052 612 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 NKD2Q969F2 451 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 BAG1Q99933 345 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 PAIP2Q9BPZ3 127 aaKnown RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 SPATA25Q9BR10 227 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 SOX7Q9BT81 388 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 ACE2Q9BYF1 805 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 XYLT2Q9H1B5 865 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 SUDS3Q9H7L9 328 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 ARFGAP3Q9NP61 516 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 ARGLU1Q9NWB6 273 aaPredicted RBP4.61□□□□□ -1.67
VPS41-212ENST00000482217 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS41-212ENST00000482217 MTRRQ9UBK8 725 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 AASSQ9UDR5 926 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 ADAM29Q9UKF5 820 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 CDC42EP3Q9UKI2 254 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 USP19O94966 1318 aa4.61□□□□□ -1.67
VPS41-212ENST00000482217 A0A0B4J203 849 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 A0A1W2PPH5 198 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 PLOD2O00469 737 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 SLC7A4O43246 635 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 KIF1CO43896 1103 aaKnown RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 HRGP04196 525 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 ADRB2P07550 413 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 SKILP12757 684 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 TNFSF4P23510 183 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 HOXD10P28358 340 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 PRPHP41219 470 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 KCNC1P48547 511 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 MEOX1P50221 254 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 DRG2P55039 364 aaKnown RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 ADKP55263 362 aaKnown RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 CDK17Q00537 523 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 AP1B1Q10567 949 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 COX10Q12887 443 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 MALLQ13021 153 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 CDC16Q13042 620 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 SCARB2Q14108 478 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 SPARCL1Q14515 664 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 SEMA3AQ14563 771 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 USP10Q14694 798 aaKnown RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 POSTNQ15063 836 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 PPA1Q15181 289 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 SMAD1Q15797 465 aaKnown RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 ADRM1Q16186 407 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 KIAA0753Q2KHM9 967 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 MMEL1Q495T6 779 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 MUM1L1Q5H9M0 696 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 DGKKQ5KSL6 1271 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 MCTP2Q6DN12 878 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 RPUSD3Q6P087 351 aaKnown RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 GGT6Q6P531 493 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 FIP1L1Q6UN15 594 aaKnown RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 FAM180AQ6UWF9 173 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 ABRAXAS1Q6UWZ7 409 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 LMBR1LQ6UX01 489 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 BTNL9Q6UXG8 535 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 KDELC2Q7Z4H8 507 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 SRGAP1Q7Z6B7 1085 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 FRMD5Q7Z6J6 570 aa4.6□□□□□ -1.67
VPS41-212ENST00000482217 ZNF761Q86XN6 746 aaPredicted RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 SLC44A2Q8IWA5 706 aaPredicted RBP4.6□□□□□ -1.67
VPS41-212ENST00000482217 UNC5BQ8IZJ1 945 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms