RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 NUMBLQ9Y6R0 609 aa18.32■□□□□ 0.52
HSPG2-209ENST00000480900 PTPRJQ12913 1337 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 ZNF197O14709 1029 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 NARSO43776 548 aaKnown RBP18.31■□□□□ 0.52
HSPG2-209ENST00000480900 KRT19P08727 400 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 SRFP11831 508 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 EPHA5P54756 1037 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 SMARCB1Q12824 385 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 BFSP1Q12934 665 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 STK4Q13043 487 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 DUSP4Q13115 394 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 PSMD6Q15008 389 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 DUOXA2Q1HG44 320 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 LMBRD2Q68DH5 695 aaPredicted RBP18.31■□□□□ 0.52
HSPG2-209ENST00000480900 TMEM86AQ8N2M4 240 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 ATAD1Q8NBU5 361 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 OR5B17Q8NGF7 314 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 SPATA18Q8TC71 538 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 ING5Q8WYH8 240 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 CRISPLD1Q9H336 500 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 GOLPH3LQ9H4A5 285 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 GDPD2Q9HCC8 539 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 GDAP2Q9NXN4 497 aa18.31■□□□□ 0.52
HSPG2-209ENST00000480900 R3HCC1Q9Y3T6 440 aaKnown RBP18.31■□□□□ 0.52
HSPG2-209ENST00000480900 F5P12259 2224 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 ZNF638Q14966 1978 aaKnown RBP18.3■□□□□ 0.52
HSPG2-209ENST00000480900 HUS1O60921 280 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
HSPG2-209ENST00000480900 RPN1P04843 607 aaKnown RBP18.3■□□□□ 0.52
HSPG2-209ENST00000480900 CEBPBP17676 345 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 EPHB3P54753 998 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 CYP24A1Q07973 514 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 SLC39A12Q504Y0 691 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 CYP4A22Q5TCH4 519 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 PARM1Q6UWI2 310 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 KRBA2Q6ZNG9 492 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 PDZD4Q76G19 769 aaPredicted RBP18.3■□□□□ 0.52
HSPG2-209ENST00000480900 PDCL2Q8N4E4 241 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 RDH13Q8NBN7 331 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 C2orf15Q8WU43 125 aaKnown RBP18.3■□□□□ 0.52
HSPG2-209ENST00000480900 FGF14Q92915 247 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 CCDC47Q96A33 483 aaKnown RBP18.3■□□□□ 0.52
HSPG2-209ENST00000480900 FNBP1Q96RU3 617 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 CGRRF1Q99675 332 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 ASAH2Q9NR71 780 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 WNT16Q9UBV4 365 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 FBXL21Q9UKT6 434 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 L1RE1Q9UN81 338 aa18.3■□□□□ 0.52
HSPG2-209ENST00000480900 PTPRDP23468 1912 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 NUP210Q8TEM1 1887 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-209ENST00000480900 ZNF202O95125 648 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 AVPR2P30518 371 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 PLA2G5P39877 138 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 ALDH1A3P47895 512 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 VCPP55072 806 aaKnown RBP18.29■□□□□ 0.52
HSPG2-209ENST00000480900 MYO1EQ12965 1108 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 SCARA3Q6AZY7 606 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 DCP1BQ8IZD4 617 aaKnown RBP18.29■□□□□ 0.52
HSPG2-209ENST00000480900 TOP6BLQ8N6T0 577 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 TMEM174Q8WUU8 243 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 TCEAL4Q96EI5 215 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 PRRX2Q99811 253 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 MFSD1Q9H3U5 465 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 SLC2A4RGQ9NR83 387 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 SLC27A5Q9Y2P5 690 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 ASB3Q9Y575 518 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 MIA3Q5JRA6 1907 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 OBSL1O75147 1896 aa18.29■□□□□ 0.52
HSPG2-209ENST00000480900 PDXKO00764 312 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 EXOC3O60645 756 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 RHOBTB3O94955 611 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 DLATP10515 647 aaKnown RBP18.28■□□□□ 0.52
HSPG2-209ENST00000480900 TNNI1P19237 187 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 CCR2P41597 374 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 TUFMP49411 452 aaKnown RBP18.28■□□□□ 0.52
HSPG2-209ENST00000480900 TSPY1Q01534 308 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 DPYDQ12882 1025 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 LRRTM3Q86VH5 581 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 SLC9A9Q8IVB4 645 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 HS6ST3Q8IZP7 471 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 TTC9BQ8N6N2 239 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 SPPL2BQ8TCT7 592 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 FAM122AQ96E09 287 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 MCRS1Q96EZ8 462 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 CCDC34Q96HJ3 373 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 HPDLQ96IR7 371 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 RPP25Q9BUL9 199 aaKnown RBP18.28■□□□□ 0.52
HSPG2-209ENST00000480900 KCTD10Q9H3F6 313 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 SNX9Q9Y5X1 595 aa18.28■□□□□ 0.52
HSPG2-209ENST00000480900 ECI2O75521 394 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 KIF20AO95235 890 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 CFHP08603 1231 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 MYL4P12829 197 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 MYL7Q01449 175 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 ASTLQ6HA08 431 aaPredicted RBP18.27■□□□□ 0.52
HSPG2-209ENST00000480900 DPH6Q7L8W6 267 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 TRAPPC11Q7Z392 1133 aa18.27■□□□□ 0.52
HSPG2-209ENST00000480900 LIMS2Q7Z4I7 341 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms