RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 HCSTQ9UBK5 93 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CDH9Q9ULB4 789 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 KIAA1257Q9ULG3 409 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 CNTN6Q9UQ52 1028 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 XIRP2A4UGR9 3374 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 PTPRJQ12913 1337 aa5.46□□□□□ -1.54
HDAC6-223ENST00000480525 MUC3AQ02505 3323 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 GOLGA8IPA6NC78 632 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 GRXCR2A6NFK2 248 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 GOLGA8JA6NMD2 632 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 HIDE1A8MVS5 230 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 NT5C1B-RDH14C9J2C7 533 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 CYB561D2O14569 222 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 SPTLC1O15269 473 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 TGM5O43548 720 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 TBX10O75333 385 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 VNN1O95497 513 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 DLATP10515 647 aaKnown RBP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF18P17022 549 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 KLRC2P26717 231 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 TKTP29401 623 aaKnown RBP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 POLR2BP30876 1174 aaKnown RBP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 PBX3P40426 434 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 PPP3CCP48454 512 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 NRIP1P48552 1158 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 FMO5P49326 533 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 WNT7BP56706 349 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 TNNC1P63316 161 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 NOP14P78316 857 aaKnown RBP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 TSPY1Q01534 308 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 ROR1Q01973 937 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 MYL5Q02045 173 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 PPP3CAQ08209 521 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 TRPC3Q13507 836 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 STILQ15468 1287 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 MAN2A1Q16706 1144 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 SOWAHAQ2M3V2 549 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF699Q32M78 642 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 DPCR1Q3MIW9 517 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 SEZ6Q53EL9 994 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF667Q5HYK9 610 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 INTS6LQ5JSJ4 861 aaKnown RBP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 CEP135Q66GS9 1140 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 CES5AQ6NT32 575 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 DSTYKQ6XUX3 929 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 C4orf50Q6ZRC1 276 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 IRF2BP1Q8IU81 584 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 SMYD4Q8IYR2 804 aaPredicted RBP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 SCML4Q8N228 414 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 PLCD3Q8N3E9 789 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 PDCL2Q8N4E4 241 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF276Q8N554 614 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 LMO3Q8TAP4 145 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 PLEKHO2Q8TD55 490 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 KBTBD7Q8WVZ9 684 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 RIN2Q8WYP3 895 aaPredicted RBP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 ZNF516Q92618 1163 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 TRMT2BQ96GJ1 504 aaKnown RBP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 SPATA17Q96L03 361 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 MYRFLQ96LU7 910 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 RIPOR3Q96MK2 946 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 MED15Q96RN5 788 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 ANP32EQ9BTT0 268 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 PRKD2Q9BZL6 878 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 UBXN6Q9BZV1 441 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 GPR88Q9GZN0 384 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 NIF3L1Q9GZT8 377 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 S1PR5Q9H228 398 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 IKZF4Q9H2S9 585 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 GOLGA2P5Q9HBQ8 144 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 PLCB1Q9NQ66 1216 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 RAB20Q9NX57 234 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 CLEC1BQ9P126 229 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 TMEM63CQ9P1W3 806 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 CEP72Q9P209 647 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 CD207Q9UJ71 328 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 MTUS1Q9ULD2 1270 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 AGAP1Q9UPQ3 857 aa5.45□□□□□ -1.54
HDAC6-223ENST00000480525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.45□□□□□ -1.54
HDAC6-223ENST00000480525 A0A0C4DFX4 3053 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 FAM92AA1XBS5 289 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 WDR27A2RRH5 827 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 TRIM49BA6NDI0 452 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 C19orf67A6NJJ6 358 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 SMTNL1A8MU46 457 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 XYLBO75191 536 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 CST3P01034 146 aaPredicted RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 HLA-DRAP01903 254 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 AFPP02771 609 aaKnown RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 PAEPP09466 180 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 TCF3P15923 654 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 IGFBP4P22692 258 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 OR1D2P34982 312 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 ASPAP45381 313 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 TUBP50607 506 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 PDE6CP51160 858 aa5.44□□□□□ -1.54
HDAC6-223ENST00000480525 MLLT6P55198 1093 aaPredicted RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 RPL10AP62906 217 aaKnown RBP5.44□□□□□ -1.54
HDAC6-223ENST00000480525 DLG4P78352 724 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms